DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and Trl

DIOPT Version :10

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster


Alignment Length:636 Identity:149/636 - (23%)
Similarity:239/636 - (37%) Gaps:174/636 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LPQQ--YCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYA 64
            ||..  |.|.|..:.::|.:....|...|...|.|||..|:...||::||||.|.|...:|.|..
  Fly     3 LPMNSLYSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTP 67

  Fly    65 SERDPIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLA--EVTWRD----- 122
            . :.|::::..|...:::.|:||:|:||::|:|:.|||||:.|..|.|:|||  .||..|     
  Fly    68 C-KHPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLAPQTVTKDDYTTHS 131

  Fly   123 -----------DEDGPPPPMAAAEFHSPPRSLAESYAQDL-----ILQHQQQ-----QQQGPAAP 166
                       |:|.....:|.|    |.:::.....:|:     |||...|     |||.....
  Fly   132 IQLQHMIPQHHDQDQLIATIATA----PQQTVHAQVVEDIHHQGQILQATTQTNAAGQQQTIVTT 192

  Fly   167 PLNLHSSAALLERDRERERERDRERLSP---------GMEGVLGRMPVMTPLTGASGSAGVGSVS 222
            ....|..|.:......|:|:...:::||         ||:.::|     || |.:.||..|..|.
  Fly   193 DAAKHDQAVIQAFLPARKRKPRVKKMSPTAPKISKVEGMDTIMG-----TP-TSSHGSGSVQQVL 251

  Fly   223 GGTSLEG----VAPVEHFLGPKRKRGRPPLD-----DAYDVFNVRKLAQYAANLEPAQRA----- 273
            |....||    ..|:....|.|       ::     |..::..|.........:.|||.|     
  Fly   252 GENGAEGQLLSSTPIIKSEGQK-------VETIVTMDPNNMIPVTSANAATGEITPAQGATGSSG 309

  Fly   274 -----YLET-----ARH--FTEEPPLAAHAASMASPPAACP-----PKQRQRLRHQQQQQQQLLQ 321
                 .|.|     |:|  .||:|    .:.|.:..||.||     .:|.:.|| :..:.:...:
  Fly   310 GNTSGVLSTPKAKRAKHPPGTEKP----RSRSQSEQPATCPICYAVIRQSRNLR-RHLELRHFAK 369

  Fly   322 SESSDQEQPAAGQDW---SNLEPNGSATPKLLSDGD-------ANKQETEGGDESLPA---VLTT 373
            .....:::..:|.|.   |::|.|.:|      :||       |....:.||..|..:   ..:.
  Fly   370 PGVKKEKKSKSGNDTTLDSSMEMNTTA------EGDNTVGSDGAGGAGSAGGQSSATSGKKSSSG 428

  Fly   374 ASSSGTKKLEKIGERRERHGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLVANRAE 438
            :|.||:..|...|...:    ::..:.|:...|..    .|::||...|..::.:.:.....:|.
  Fly   429 SSGSGSGALSSSGSVPQ----VQTVQSLHTLQGVQ----VKKDPDAQQQQQQQQQQQQQQQQQAM 485

  Fly   439 SPRPTVVIPASFACKYEGGVTAAGGGSGSGTGSGSLG-----------------SSYLINEHGML 486
                                          |.||:.|                 ......:...|
  Fly   486 ------------------------------TVSGATGGQVQQQVQQVQQQVQQQQQQQQQQQQQL 520

  Fly   487 MAHEFAPNVASAAATAAVAVAAAAAAVANASAGNGNGGQDVS---GSGTGA 534
            ..|:...  :|...|.|...|.||||....:||...  |.|:   ||.:||
  Fly   521 QHHQIID--SSGNITTATTSAQAAAAAQQQAAGQQQ--QLVAQSDGSESGA 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB_POZ_BAB-like 30..114 CDD:349624 33/83 (40%)
HTH_psq 587..622 CDD:283007
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 33/83 (40%)
GAGA 319..372 CDD:462719 13/57 (23%)
Blue background indicates that the domain is not in the aligned region.

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