DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and pre-lola-G

DIOPT Version :10

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001260870.2 Gene:pre-lola-G / 14462577 FlyBaseID:FBgn0264817 Length:436 Species:Drosophila melanogaster


Alignment Length:340 Identity:64/340 - (18%)
Similarity:112/340 - (32%) Gaps:118/340 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 AANLEPAQRAYLETARHFTEEPPLAAHAASMASPPAACPPK----------QRQRLRHQQQQ--Q 316
            ||:..|..:..|:||...||.......:..:|:..||..||          .|..|.:.|||  .
  Fly   130 AASFHPRPKYTLKTAASSTEHTTAIPTSVLVANSAAALTPKPQAAVIAEALMRNGLHNFQQQLRA 194

  Fly   317 QQLLQSESSDQEQPAAGQDWSNLEPNGSATP--KLLSDGDANKQETEGGDESLPAVLTTASSSGT 379
            |::|:.:                      ||  ::..:.|.   |..|||           .:.|
  Fly   195 QEILRQQ----------------------TPHRRIKEENDV---EIAGGD-----------ITPT 223

  Fly   380 KKLEKIGERRERHGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLVANRAESPRPTV 444
            |.||.: .|:::...|||:        |.|.:|.....|:........::.||:..         
  Fly   224 KILENL-LRKQQERDLRHS--------ECENEPGYSTEDDEEGRYHAFDDIHLMEQ--------- 270

  Fly   445 VIPASFACKYEGGVTAAGGGSGSGTGSGSLGSSYLINEHG-----MLMAHEFAPNVASAAATAAV 504
                            :||..|:.:|.|...:    |.||     :|.||:...|:....:.   
  Fly   271 ----------------SGGKFGNNSGMGMFNA----NAHGGSASSILDAHQAFRNLEFTLSD--- 312

  Fly   505 AVAAAAAAVANASAGNGNGGQDVSGSGTGAAADYPDIKLEDYDAAELRLTNEELSQWQDVIKMDD 569
                        ..|:.:.|...|.:|.|         |:.....|.|...::. :|:..::..:
  Fly   313 ------------YGGSSSNGSTTSPNGIG---------LDGEPVYECRHCGKKY-RWKSTLRRHE 355

  Fly   570 YLAKGRRPQFWEEPF 584
            .:..|.:....:.|:
  Fly   356 NVECGGKEPSHQCPY 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB_POZ_BAB-like 30..114 CDD:349624
HTH_psq 587..622 CDD:283007
pre-lola-GNP_001260870.2 C2H2 Zn finger 338..358 CDD:275368 2/20 (10%)
zf-H2C2_5 366..389 CDD:404746 1/5 (20%)
C2H2 Zn finger 368..388 CDD:275368 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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