DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shmt and SHM4

DIOPT Version :10

Sequence 1:NP_572278.1 Gene:Shmt / 31524 FlyBaseID:FBgn0029823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_193129.1 Gene:SHM4 / 827027 AraportID:AT4G13930 Length:471 Species:Arabidopsis thaliana


Alignment Length:457 Identity:256/457 - (56%)
Similarity:326/457 - (71%) Gaps:7/457 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TPLAQGDPELAELIKKEKERQREGLEMIASENFTSVAVLESLSSCLTNKYSEGYPGKRYYGGNEY 143
            |.|...|||:.:||:|||.||..|:|:||||||||.||:|:|.|.||||||||.||.|||||||:
plant    10 TSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRYYGGNEF 74

  Fly   144 IDRIELLAQQRGRELFNLDDEKWGVNVQPYSGSPANLAVYTGVCRPHDRIMGLDLPDGGHLTHGF 208
            ||.||.|.:.|..|.|:.|...||||||||||||||.|.||.:.:|||||||||||.|||||||:
plant    75 IDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGY 139

  Fly   209 FTP-TKKISATSIFFESMPYKVNPETGIIDYDKLAEAAKNFRPQIIIAGISCYSRLLDYARFRQI 272
            :|. .||||||||:|||:|||||..||.||||||.|.|.:|||:::|.|.|.|.|..||||||.|
plant   140 YTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLICGGSAYPRDWDYARFRAI 204

  Fly   273 CDDVGAYLMADMAHVAGIVAAGLIPSPFEWADIVTTTTHKTLRGPRAGVIFFRKGVR-STKANGD 336
            .|.|||.|:.||||::|:|||....:|||:.|:|||||||:|||||||:||:|||.: ..|...:
plant   205 ADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPE 269

  Fly   337 KVLYDLEERINQAVFPSLQGGPHNNAVAGIATAFKQAKSPEFKAYQTQVLKNAKALCDGLISRGY 401
            ..:||.|::||.||||:|||||||:.:..:|.|.|||.:|.||.|..||..||.||.:.|:|:||
plant   270 GAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVYAKQVKANAVALGNYLMSKGY 334

  Fly   402 QVATGGTDVHLVLVDVRKAGLTGAKAEYILEEVGIACNKNTVPGDKSAMNPSGIRLGTPALTTRG 466
            |:.|.||:.||||.|:|..||||.|.|.:.:...|..|||.|.||.||:.|.|:|:|.||:|:||
plant   335 QIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRG 399

  Fly   467 LAEQDIEQVVAFIDAALKVGVQAAKLAGSPKITDYHKTLAENVELKAQVDEIRKNVAQFSRKFPL 531
            |.|:|.||:..|:..|:.:.:...|..|. .:.|::|.|..|.:|    |:::.:|.:||..:.:
plant   400 LVEKDFEQIGEFLSRAVTLTLDIQKTYGK-LLKDFNKGLVNNKDL----DQLKADVEKFSASYEM 459

  Fly   532 PG 533
            ||
plant   460 PG 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShmtNP_572278.1 PLN03226 79..536 CDD:215639 256/457 (56%)
SHM4NP_193129.1 PLN03226 1..471 CDD:215639 256/457 (56%)

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