DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12236 and YPR015C

DIOPT Version :9

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_015340.1 Gene:YPR015C / 856125 SGDID:S000006219 Length:247 Species:Saccharomyces cerevisiae


Alignment Length:188 Identity:35/188 - (18%)
Similarity:63/188 - (33%) Gaps:54/188 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 ATPQT---------------SQDATTAAAQNVAQYSSEYEILTESEMEEKYQADADNAEIAIEMT 392
            ||||.               |..|::..||:|......::       ||.::| ..|.:.::   
Yeast    97 ATPQPFPLTFVERQSCCPIYSTAASSYTAQSVPPSMQHFQ-------EENHRA-VSNEQYSL--- 150

  Fly   393 RLLGTASGTPGAGSGQVMEDSGGGSATTGPSTTVSVTQVKSDSKASGTNAALKPGSVTVARSSKS 457
                     |....||            .|.|.:|.||...|.......|.:|     :.:....
Yeast   151 ---------PNVHIGQ------------NPGTLLSQTQTDLDLIQKQLRAVVK-----LRKQCPI 189

  Fly   458 GATASAPPAGSDEESVQYTGLAPLNCSF--CGRPLKSVNALRRHIASRHSEIQGKEHE 513
            .....:.|:......:.:||..|..|::  |.:.....:.:.||:.:...:|..|:|:
Yeast   190 CGKVCSRPSTLRTHYLIHTGDTPFKCTWEHCNKSFNVKSNMLRHLRTHQKKIAKKKHQ 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB 22..116 CDD:279045
BTB 33..116 CDD:197585
Herpes_capsid <376..467 CDD:283714 15/90 (17%)
C2H2 Zn finger 483..512 CDD:275371 6/30 (20%)
C2H2 Zn finger 514..535 CDD:275371 35/188 (19%)
YPR015CNP_015340.1 COG5048 <17..247 CDD:227381 34/186 (18%)
C2H2 Zn finger 187..207 CDD:275370 1/19 (5%)
C2H2 Zn finger 215..237 CDD:275370 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I1809
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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