DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12236 and Nacc1

DIOPT Version :9

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_080064.3 Gene:Nacc1 / 66830 MGIID:1914080 Length:514 Species:Mus musculus


Alignment Length:345 Identity:74/345 - (21%)
Similarity:128/345 - (37%) Gaps:82/345 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATTQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENP 65
            ||.|.|..:  .|:...:...|:..||...:.|||:.|.|...|||:.||::.||||:::|..: 
Mouse     1 MAQTLQMEI--PNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNSS- 62

  Fly    66 HPHPVIIFKFIKFEDLNSIIEFMYQG--EVNVQQEAL----QSFLQTAELLA------------- 111
            ....|.:...::.:....|:.|.|.|  .:|:..:.|    ..|||..|::.             
Mouse    63 RSAVVELPAAVQPQSFQQILTFCYTGRLSMNMGDQFLLIYTAGFLQIQEIMEKGTEFFLKVSSPS 127

  Fly   112 --VQGLTAEE--KEKPQIPVA------------PLISEHKL------IKTIPSTIRAVNEQQQQV 154
              .|||..||  ..:||.|||            ||:|..|.      ::..|...|..:..|::.
Mouse   128 CDSQGLHPEEAPSSEPQSPVAQTLGWPACSTPLPLVSRVKTEQELDSVQCTPMAKRLWDSSQKEA 192

  Fly   155 -----SNVAQAQTATQTIEIPAATLLQATNASQVP-SQVVAAAAAAAAAQQLQVQHQQQQHHHVQ 213
                 :|.::......|.::       |.|....| |...|.||.|..|....|...........
Mouse   193 GGSGGNNGSRKMAKFSTPDL-------ALNRMPQPLSMATATAAVAVVAVGGCVSGPSMSERTSP 250

  Fly   214 TTQIQHIQVQSAPPPQQQQQQQQQQQQQQQQQQQQQQ--------------QQSQQQQTTPVQTQ 264
            .|...:  ...:|.....::.:::...::...:|.:|              |.:::.:..|.|  
Mouse   251 GTSSAY--TSDSPSSYHNEEDEEEDAGEEGTDEQYRQICNMYTMYSMLNVGQTAEKVEALPEQ-- 311

  Fly   265 HLTITNAVALPAASSVKKRK 284
                   |.|.:.|.::.|:
Mouse   312 -------VVLESRSRIRVRQ 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB 22..116 CDD:279045 31/114 (27%)
BTB 33..116 CDD:197585 28/103 (27%)
Herpes_capsid <376..467 CDD:283714
C2H2 Zn finger 483..512 CDD:275371
C2H2 Zn finger 514..535 CDD:275371
Nacc1NP_080064.3 BTB_POZ_BTBD14B_NAC1 3..125 CDD:349599 32/124 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..205 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..279 2/38 (5%)
BEN 382..460 CDD:214981
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BJF0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7738
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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