DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12236 and CG6765

DIOPT Version :9

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001261582.1 Gene:CG6765 / 38971 FlyBaseID:FBgn0035903 Length:681 Species:Drosophila melanogaster


Alignment Length:661 Identity:106/661 - (16%)
Similarity:207/661 - (31%) Gaps:215/661 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLC-----------VDGRRIKAHKVVLSSCSSYFK 58
            :.|.|:|:::|.:|..|:.....|:.|.||.|.           :....|.|||.:||:.|.:|.
  Fly     4 ENYHLKWDSHLTYLNSSIATLYKNEKFADVVLYSSYNSSGIPSDIPTVGISAHKFILSASSQFFA 68

  Fly    59 EIFKENPHPHP-----VIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAE 118
            .:|:..|..:|     |::...:....:..::::||.||..|..:.|...|:..|:|.::||...
  Fly    69 TMFETAPITNPNGVLYVVLPPDLSHRAIQILVQYMYSGEATVSNDILNEVLRGGEILKIRGLCRT 133

  Fly   119 EKEKPQIPVAPLISEHKLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATLLQATNASQV 183
            .........:.:.:.|.     |.:: |.:...::.|.:..: ..|:|...|.....|:|.::|:
  Fly   134 SSSNGGGSGSVVTTTHH-----PHSL-AGHLHPREASTMYMS-NGTRTALPPPPPPPQSTMSAQL 191

  Fly   184 PSQVVAAAAAAAAAQQLQVQHQQQQH----HHVQTTQIQ-------------------------- 218
            ...:.|:....:....|...|....|    ||....|.:                          
  Fly   192 QGDLYASKPGGSTRFALDHHHLSSHHSHLNHHNPQQQFRGLGASVMPKDSPVIIKSPKLAAHTGL 256

  Fly   219 -------------------------------HIQVQSAPPP------------------------ 228
                                           .::.||.|||                        
  Fly   257 LTVASSSKLGISVNKEVAIDPEDKCCFAAPGQLESQSHPPPPTTTTTTVGGGGGSVGGSGAPPSQ 321

  Fly   229 ---------------------QQQQQQQQQQQQQQQQQQQQQQ---------------QQSQQQQ 257
                                 .|.:...::.:.::|..:::.:               ::|:...
  Fly   322 PISICTEVGCSSCPLTAGPGADQAETTLRRTEYEEQALRERNEVGLVFERRLRRESACERSRDYY 386

  Fly   258 TTPVQTQHLTITNAVALPAAS-------------------SVKKRKITFSDDDDNMYTTETVDYA 303
            ..| ..:|:..:...|.|...                   ::|:....:|::..|..:....:..
  Fly   387 EAP-HFEHVVSSRLAATPPPPPQQAPPSHPPTLRHPHNFLTIKQEPTDWSNNPPNASSASNNNNL 450

  Fly   304 VKDEQTIVKTAE-MTFLRGAVKMDIPDYIVGEVDDRLSDGATPQTSQDATTAAAQNVAQYSSEYE 367
              :|..:....: :.|...|||:::.           .|..||....:..|....|..:.....|
  Fly   451 --EELPLASPKQPLDFKMSAVKLEVN-----------RDRGTPSEESEEHTLRDYNNFKQLLVCE 502

  Fly   368 ILTESEMEEKYQADADNAEIAIEMTRLLGTASGTPGAGSGQVMEDSGGGSATTGPSTTVSVTQVK 432
            |..:|..:.|.            :.|.|||.:|.|..|:.:.:..|....:||..|:.:::..||
  Fly   503 ICQKSFEDTKM------------LVRHLGTHAGDPTGGTERNLLPSSASGSTTSASSNLALRSVK 555

  Fly   433 SDSKASGTNAALKPGSVTVARSSKSGATASAPPAGSDEESVQYTGLAPLNCSFCGRPLKSVNALR 497
            :                   ...|.....|......|.:.|      .|.|..|.....:.....
  Fly   556 T-------------------YVPKKRRRVSQQENNMDHDHV------TLLCDLCSTSFDTPAEWV 595

  Fly   498 RHIASRHSEIQ 508
            ||:.|:|:||:
  Fly   596 RHMNSQHTEIE 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB 22..116 CDD:279045 27/109 (25%)
BTB 33..116 CDD:197585 25/98 (26%)
Herpes_capsid <376..467 CDD:283714 16/90 (18%)
C2H2 Zn finger 483..512 CDD:275371 8/26 (31%)
C2H2 Zn finger 514..535 CDD:275371
CG6765NP_001261582.1 BTB 24..132 CDD:279045 28/107 (26%)
BTB 53..130 CDD:197585 21/76 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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