DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12236 and CG15812

DIOPT Version :9

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster


Alignment Length:368 Identity:80/368 - (21%)
Similarity:136/368 - (36%) Gaps:91/368 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LRW---NNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPH-PHP 69
            |:|   ::.:..:..||.|...:.:.|..|.  ||.|::||..|||:||...:.:..:.|. ...
  Fly     4 LKWMGHSSTIMDIQRSLRNDNQHCEVVLASR--DGVRVRAHLFVLSTCSELMRNLLVDVPRGQEA 66

  Fly    70 VIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQIPVAPLISEH 134
            .|:...|:.:.|..::.|:|.||.::...:|..||:...||.::...:.|......|.:..:..|
  Fly    67 TIMLPDIRGDLLECMLSFIYMGETSLPSASLPEFLEAINLLGIKSAISFECNPSASPPSVDVENH 131

  Fly   135 KLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATLLQATNASQVPSQVVAAAAAAAAAQQ 199
            .|.                   |..|::.| .::|..|.||   :..:.|..:|:..|...|..|
  Fly   132 SLA-------------------VESAKSIT-GLQIAEAELL---DDEEEPHPMVSVPATTLAGSQ 173

  Fly   200 LQVQHQQQQHHHVQ-------TTQIQHIQVQSAPPPQQQQQQQQQQQQQQQQQQQQQQQQSQQQQ 257
            .|..|..:...::.       |..|:|:...|                            |..|.
  Fly   174 HQPSHSSRSLEYIDVYEPPKITYSIEHMDGSS----------------------------SGNQF 210

  Fly   258 TTPVQTQHLTITNAVALPAASSVKK----------RKITFSDDD---DNMYTTETVDYAVKDEQT 309
            .....|...|||.     :|||:.|          .::...|||   |....:|..:..:.||: 
  Fly   211 ILTENTGTFTITQ-----SASSLSKIEADETGTSGAEVDLGDDDVDADLAEDSEEHESQMIDEE- 269

  Fly   310 IVKTAEMTFLRGAVKM----DIPDYIVG-EVDD---RLSDGAT 344
            ..:...:..|....:|    |:.|.:|. |:||   :|..|.|
  Fly   270 FAQADPLMELEAGTEMDDDDDVHDQLVDEEIDDKPRKLGGGKT 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB 22..116 CDD:279045 27/94 (29%)
BTB 33..116 CDD:197585 24/83 (29%)
Herpes_capsid <376..467 CDD:283714
C2H2 Zn finger 483..512 CDD:275371
C2H2 Zn finger 514..535 CDD:275371
CG15812NP_523897.2 BTB 20..113 CDD:279045 27/94 (29%)
BTB 35..118 CDD:197585 24/82 (29%)
HTH_psq 348..392 CDD:283007
HTH_psq 458..501 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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