Protein Alignment CG12236 and psq

DIOPT Version :9

• Sequence 1: NP_727050.1
• Gene: CG12236 / 31523
• FlyBaseID: FBgn0029822
• Length: 553
• Species: Drosophila melanogaster
• Sequence 2: NP_001369078.1
• Gene: psq / 36118
• FlyBaseID: FBgn0263102
• Length: 1170
• Species: Drosophila melanogaster
• Alignment Length: 573
• Identity: 154/573 - (26%)
• Similarity: 227/573 - (39%)
• Gaps: 163/573 - (28%)

  Fly     5 QQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPHPHP 69
            |.:|||||||...:|......|.:..||||:|..:...:||||||||:||:||:::..|||..||
  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHP 72

  Fly    70 VIIFKF-IKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQIPVAPLISE 133
            .||... |.|.||.:||:|:|:||::|.:..||..|:|||.|.::||.
  Fly    73 TIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLC----------------- 120

  Fly   134 HKLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTI--EIPAATLLQATNASQVPSQVVAAAAAAAA 196
                           |..:...::..|.|||.|:  .|..|.:....||:.||         .|.
  Fly   121 ---------------ETAENADDLNDAATATITVSENIQQAVVGNIVNAAIVP---------GAP 161

  Fly   197 AQQLQVQHQQQQHHHVQTTQIQHIQVQSAPPPQQQQQQQQQQQQQQQQQQQQQQQQSQQQQTTPV 261
            :..|:   ||||||                  |||||||.|:|.||||...|||||.|||....:
  Fly   162 SPSLE---QQQQHH------------------QQQQQQQAQEQHQQQQVHAQQQQQQQQQINAAL 205

  Fly   262 QTQHLTITNAVALPAASSVKKRKITFSDDDDNMYTTETVDYAVKDEQTIVKTAEMTFLRGAVKMD 326
            .|||...:.:|:|..       ::..|....:..:......|.:....:..|...:.|:   :..
  Fly   206 LTQHGVSSGSVSLSG-------QLLSSSASGSSGSLAGGQQASQTPSGLQPTPRKSRLK---RSK 260

  Fly   327 IPDYIVGEVDDRLSDGATPQTSQDATTAAAQNVAQYSSEYE---ILTESEMEEKYQADADNAEIA 388
            .||         ||.|....:|..:::.:.|...|.:..:.   ||        .|....|:.::
  Fly   261 SPD---------LSSGGGAGSSGGSSSGSTQQQPQPAHHHHPQTIL--------IQGQNPNSIVS 308

  Fly   389 IEMTRLLGTASGT--PGAGSGQVMEDS---------------GGGSATTG--------------- 421
            ::.     ||.|.  |.:|||   :||               |.|..|.|
  Fly   309 LQQ-----TADGNYIPVSGSG---DDSDAEDHEHEHNHGHGHGHGGHTHGHGHSHEHSHDHEHEH 365

  Fly   422 -PS----TTVSVTQVKSDSKASGTNAALKPG----------SVTVARSSKSGATASAPPAGSDEE 471
             |:    |..||....|:|.::..|||...|          .:.|||.            |.|.:
  Fly   366 KPNKICKTEHSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARD------------GKDTK 418

  Fly   472 SVQYTGLAPLNCSFCGRPLKSVNALRRHIASRHSEIQGKEHECFICMKSFKTK 524
            ::...|:. :|....|.|:..::......|...:.:...||....|..|..|:
  Fly   419 NMTSLGMG-MNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTR 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12236	NP_727050.1	BTB	22..116	CDD:279045	44/94 (47%)
		BTB	33..116	CDD:197585	41/83 (49%)
		Herpes_capsid	<376..467	CDD:283714	28/137 (20%)
		C2H2 Zn finger	483..512	CDD:275371	3/28 (11%)
		C2H2 Zn finger	514..535	CDD:275371	3/11 (27%)
psq	NP_001369078.1	BTB_POZ_BAB-like	34..118	CDD:349624	42/83 (51%)
		HTH_psq	717..>747	CDD:283007
		HTH_psq	767..804	CDD:283007
		HTH_psq	821..866	CDD:283007
		HTH_psq	873..916	CDD:283007

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	69	1.000	Domainoid score	I9606
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1229475at2759
OrthoFinder	1	1.000	-	-		FOG0000141
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23110
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	5.020