DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12236 and CG8924

DIOPT Version :9

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster


Alignment Length:550 Identity:130/550 - (23%)
Similarity:214/550 - (38%) Gaps:167/550 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TQQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPHPH 68
            ||::.:|||::|..:..:.........||||:|..:|:::..|::||::||:||:.|..|:|..|
  Fly     5 TQEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKH 69

  Fly    69 PVIIF-KFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQIPVAPLIS 132
            ||||. :.||..::.::::|||:|||||.|..|...|:.||.|.::||...|        ||   
  Fly    70 PVIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGLYGSE--------AP--- 123

  Fly   133 EHKLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATLLQ-------------ATNASQVP 184
                          :|.::.|       |.:.:..:.||||..:             |||::   
  Fly   124 --------------INYKKLQ-------QASLEAAKDPAATTARSFKHVDSAETDDAATNST--- 164

  Fly   185 SQVVAAAAAAAAAQQLQVQHQQQQHHHVQTTQIQHIQVQSAPPPQQQQQQQQQQQQQQQQQQQQQ 249
               .:.....::|..|.|.|||                    |...::|....:||||||||||.
  Fly   165 ---TSTTMTTSSAPPLPVNHQQ--------------------PTVLKRQNPDARQQQQQQQQQQV 206

  Fly   250 QQQSQQQQTTPVQTQHLTITNAVALPAASSVKKRKITFSDD----------------DDNMYTTE 298
            ||:.|...:...|....|.||.:...:.:..:       ||                ||...:.:
  Fly   207 QQRPQINGSNAQQPSKATSTNVLGSHSNAPTE-------DDSGDEVPNNWNAYGEQFDDCNISAQ 264

  Fly   299 TVD------YAVKDEQTIVKTAEMTFLRGAVKMDIPDYIVGEVDDRLSDGATP-----------Q 346
            .||      .:::..:..::..:..:|...|: |..:|:....::..|..||.           .
  Fly   265 AVDNKMNVHLSLQQARMQMQLQQQQYLDSNVE-DDHNYVAAHDENNDSSFATGVPCGSGLSLSLD 328

  Fly   347 TSQDATTAAAQNVAQYSS-----EYEILTESEME-----------EKYQADADNAEIAIEMTRLL 395
            |..| |:|.......:||     .|:.:..||..           |.:|..::...|.:...|..
  Fly   329 TDLD-TSANTSGGLSHSSIDGYTSYKRVRRSEASLAQAAKCVSKGETFQTVSNMFNIPVSTIRFY 392

  Fly   396 GTASG-----TPGAG---SGQVMEDSGGGSATTGPSTTVSVT-------------------QVKS 433
            ....|     ..|.|   :|.::..:..|..:|.|:   |:|                   |:..
  Fly   393 MARKGILPKRKRGRGASHAGNIIITTNSGKLSTVPA---SITHPPAHPHIHTNPLPHTQSQQMSM 454

  Fly   434 DSKASGTNAALKPGSVTVARSSKSGATASA 463
            ||      ..||.| :.....|.|.|||:|
  Fly   455 DS------LHLKAG-IANTSGSNSPATATA 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB 22..116 CDD:279045 38/94 (40%)
BTB 33..116 CDD:197585 36/83 (43%)
Herpes_capsid <376..467 CDD:283714 24/114 (21%)
C2H2 Zn finger 483..512 CDD:275371
C2H2 Zn finger 514..535 CDD:275371
CG8924NP_573091.1 BTB 25..117 CDD:279045 37/91 (41%)
BTB 34..117 CDD:197585 35/82 (43%)
MerR 378..407 CDD:278788 4/28 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9606
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 50 1.000 Inparanoid score I5472
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
77.070

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