DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG12236 and CG10959

DIOPT Version :9

Sequence 1:	NP_727050.1	Gene:	CG12236 / 31523	FlyBaseID:	FBgn0029822	Length:	553	Species:	Drosophila melanogaster
Sequence 2:	NP_572451.1	Gene:	CG10959 / 31743	FlyBaseID:	FBgn0030010	Length:	443	Species:	Drosophila melanogaster

Alignment Length:	216	Identity:	45/216 - (20%)
Similarity:	74/216 - (34%)	Gaps:	51/216 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   342 GATPQTSQDATTAAAQNVA--QYSSEY----EILTESEMEEKYQADADNAEIAIEMTRLLGTASG 400
            |...:..|:....:|:.:|  .:..||    ::|:|.|       ||:. |:.:|
  Fly    77 GRLAREEQEFQGVSAEPLAVDSFKKEYLPNEDVLSEEE-------DAEQ-ELGLE---------- 123

  Fly   401 TPGAGSGQVMEDSG--------GGSATTGPSTTVSVTQVKSDSKASGTNAALKPGSVTVARSSKS 457
                      :|.|        ||..:....|..::.|...||    ::|::..|....|.....
  Fly   124 ----------QDEGNPLRIMVLGGKQSVDEETIDTMWQPDHDS----SSASVNEGCALEALLGVE 174

  Fly   458 GATASAPPA-GSDEESVQYTGLAP--LNCSFCGRPLKSVNALRRHIASRHSEIQGKEHECFICMK 519
            ......|.. |.:.:||......|  .||..|.|...:...|..|:...|...|.  .:|..|..
  Fly   175 NPQDYQPDEDGEEHQSVFKKQRQPKDYNCPHCDRRYTTQKYLNTHLKMSHPFPQA--FKCVDCKA 237

  Fly   520 SFKTKWSLSTHNSRFHREMGC 540
            :|....:|:.|..:.|.|..|
  Fly   238 TFDVDRALAQHRRKEHTEFAC 258

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG12236	NP_727050.1	BTB	22..116	CDD:279045
		BTB	33..116	CDD:197585
		Herpes_capsid	<376..467	CDD:283714	16/99 (16%)
		C2H2 Zn finger	483..512	CDD:275371	7/28 (25%)
		C2H2 Zn finger	514..535	CDD:275371	5/20 (25%)
CG10959	NP_572451.1	C2H2 Zn finger	232..253	CDD:275368	5/20 (25%)
		COG5048	<258..416	CDD:227381	1/1 (100%)
		C2H2 Zn finger	258..278	CDD:275368	1/1 (100%)
		C2H2 Zn finger	289..308	CDD:275368
		C2H2 Zn finger	316..336	CDD:275368
		zf-H2C2_2	328..353	CDD:290200
		C2H2 Zn finger	344..364	CDD:275368
		zf-H2C2_2	357..381	CDD:290200
		C2H2 Zn finger	372..392	CDD:275368
		C2H2 Zn finger	400..420	CDD:275368
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	54	1.000	Inparanoid score	I1809
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.050