DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12236 and CG3726

DIOPT Version :10

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster


Alignment Length:568 Identity:130/568 - (22%)
Similarity:217/568 - (38%) Gaps:129/568 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QQYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPHPH- 68
            |||.|||..:..:|............|.||:|..:|:.|:||:|||.:||::|..:........ 
  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYASERD 68

  Fly    69 PVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLT----AEEKEKPQIPVAP 129
            |:||.|.:.|.::..:|||||:||:||:..:|.|.|:||:.|.::||.    .::::.|..|:|.
  Fly    69 PIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMAA 133

  Fly   130 L---ISEHKLIKTIPSTIRAVNEQQQQVSNVA---QAQTATQTIE-------------------- 168
            .   .....|.::....:...::||||....|   ...::...:|                    
  Fly   134 AEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPLNLHSSAALLERDRERERERDRERLSPGMEG 198

  Fly   169 ----IPAATLLQATNASQVPSQVVAAAAAAAAAQQLQVQH------------------------- 204
                :|..|.|...:.|.....|....:....|   .|:|                         
  Fly   199 VLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVA---PVEHFLGPKRKRGRPPLDDAYDVFNVRKL 260

  Fly   205 -------QQQQHHHVQTTQ--------IQHIQVQSAPPPQ-QQQQQQQQQQQQQQQQQQQQQQQS 253
                   :..|..:::|.:        ..|....::||.. ..:|:|:.:.|||||||..|.:.|
  Fly   261 AQYAANLEPAQRAYLETARHFTEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQLLQSESS 325

  Fly   254 QQQQTTPVQTQHLTITNAVALPAASSVKKRKITFSDDDDNMYTTETVDYAVKDEQTIVKTAEMTF 318
            .|:|....|.......|..|.|.         ..||.|.|...||..|.::   ..::.||..: 
  Fly   326 DQEQPAAGQDWSNLEPNGSATPK---------LLSDGDANKQETEGGDESL---PAVLTTASSS- 377

  Fly   319 LRGAVKMDIPDYIVGEVDDRLSDGATPQTSQDATTAAAQNVAQYSSEYEI---------LTE--S 372
              |..|::    .:||..:|           ......|:.:.:.|.|.|:         |.:  .
  Fly   378 --GTKKLE----KIGERRER-----------HGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVE 425

  Fly   373 EMEEKY----QADADNAEIAIEMTRLLGTASGTPGAGSGQVMEDSGGGSATTGPSTTVSV-TQVK 432
            |:|.::    :|::....:.|..:.......|...||.|   ..||.||.:.|.|..::. ..:.
  Fly   426 EIENEHLVANRAESPRPTVVIPASFACKYEGGVTAAGGG---SGSGTGSGSLGSSYLINEHGMLM 487

  Fly   433 SDSKASGTNAALKPGSVTVARSSKSGATASAPPA-GSDEESVQYTGLA 479
            :...|....:|....:|.||.::.:.|.|||... |..:.|...||.|
  Fly   488 AHEFAPNVASAAATAAVAVAAAAAAVANASAGNGNGGQDVSGSGTGAA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB_POZ_BAB-like 31..114 CDD:349624 34/83 (41%)
C2H2 Zn finger 483..512 CDD:275371
C2H2 Zn finger 514..535 CDD:275371
CG3726NP_001284917.1 BTB_POZ_BAB-like 30..114 CDD:349624 34/83 (41%)
HTH_psq 587..622 CDD:283007
Blue background indicates that the domain is not in the aligned region.

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