DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12236 and F10B5.3

DIOPT Version :9

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_495709.1 Gene:F10B5.3 / 184285 WormBaseID:WBGene00008640 Length:471 Species:Caenorhabditis elegans


Alignment Length:566 Identity:91/566 - (16%)
Similarity:160/566 - (28%) Gaps:253/566 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKE--------------------- 63
            ||..|::..::           .:.||::|||:.|..|:::.::                     
 Worm    27 YSTKNNKSEEE-----------SVFAHRLVLSTFSPLFQQLLQDATSSSTSTTSSTSSDDVISIS 80

  Fly    64 ---NPHPHPVIIFKFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQI 125
               ...|:.:..||.        |:|.:|.|::.::..|..      |:|||.........:|:|
 Worm    81 LDLTAFPNALAAFKV--------ILEALYTGDIKMKSVAAN------EVLAVSRHCQISSLEPKI 131

  Fly   126 --PVAPLISEHKLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATLLQATNASQVPSQVV 188
              .||||                       ..|:|.....:|::.:.:...||.|:..       
 Worm   132 MSAVAPL-----------------------PLNLANILNCSQSVPLNSNPFLQYTSPP------- 166

  Fly   189 AAAAAAAAAQQLQVQHQQQQHHHVQTTQIQHIQVQSAP-----------------PPQQQQQQQQ 236
                                   :|......|.:.|.|                 .||...:..:
 Worm   167 -----------------------IQNYLSSMISLWSNPFFSALFGNTTGTPSLPFSPQSDTENSR 208

  Fly   237 QQQQQQQQQQQQQQQQSQQQQTTPVQTQHLTITNAVALPAASSVKKRKITFSDDDD----NMYTT 297
            .|.:....:                       .|:.:.|..:.::  ||..:||.:    |....
 Worm   209 TQSEGSSPR-----------------------ANSTSTPPTTDLE--KIVPNDDKEGWCRNKKYI 248

  Fly   298 ETVDYAVKDEQTIVKTAEMTFLRGAVKMDIPDYIVGEVDDRLSDGAT----------PQTSQDAT 352
            |.||                   |.....:...|.|..:. :|...|          .:...:.:
 Worm   249 EKVD-------------------GGFMCTVCRKIYGRYNS-VSYHVTIYHRNPPIKCEENGCNFS 293

  Fly   353 TAAAQNV--AQYSSEYEILTES------------------EMEEKYQA--DADNAEIAIEMTRLL 395
            |..|:.:  .:|...:..|.|:                  .|.||:.|  :.|            
 Worm   294 TREARYIHFHKYYRHHIPLPENIDLGSRKCPFCRHVSKSPAMLEKHIARHETD------------ 346

  Fly   396 GTASGTPGAGSGQVMEDSGGGSATTGPSTTVSVTQVKSDSKASGTNAALKPGSVTVARSSKSGAT 460
            ||:.|||||                     :...|.|.....:.|...:.|        :.|...
 Worm   347 GTSGGTPGA---------------------LKRAQSKKKIVPTMTTDVIDP--------NVSSIF 382

  Fly   461 ASAPPAGSDEESVQYTGLAPLNCSFCGRPLKSVNALRRHIASRHSE 506
            |...|||:          .|:.||.|.....|.:.|..|:|.:|::
 Worm   383 APTNPAGN----------IPIQCSLCPFSTHSTDLLFIHLAMQHAQ 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB 22..116 CDD:279045 20/117 (17%)
BTB 33..116 CDD:197585 19/106 (18%)
Herpes_capsid <376..467 CDD:283714 18/92 (20%)
C2H2 Zn finger 483..512 CDD:275371 8/24 (33%)
C2H2 Zn finger 514..535 CDD:275371
F10B5.3NP_495709.1 BTB_POZ_ZBTB_KLHL-like 20..122 CDD:349497 22/119 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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