DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12236 and LOC1276418

DIOPT Version :10

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_315761.5 Gene:LOC1276418 / 1276418 VectorBaseID:AGAMI1_015131 Length:1264 Species:Anopheles gambiae


Alignment Length:756 Identity:148/756 - (19%)
Similarity:232/756 - (30%) Gaps:305/756 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCV----DGRRIKAHKVVLSSCSSYFKEIFKENPH 66
            ::.|:.:.|..:|..||.|...||.:.||.|.|    |...|.||::||.:.|.||..:|::...
Mosquito   208 KFHLKQSAYQPNLNNSLTNLCKNDRYADVMLLVCNDDDNIAIPAHRLVLGTFSPYFANVFEKVAF 272

  Fly    67 -PHPVIIF----KFIKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEK------ 120
             |....|:    ..:....|..::::||.||..|..::....:...|.|.:.|...:..      
Mosquito   273 VPSSATIYVALPPTVTRAALQCLLQYMYTGEAIVHADSFDDVMMCGEFLRINGFAGKRSSGMLKG 337

  Fly   121 EKPQIPVAPLISEHKLIK---------------------------TIPSTIRA------------ 146
            ::.::...||::..|.|.                           .:|.|:||            
Mosquito   338 QQEELVSVPLVTVTKTINMDAGDARRGSPATPAPANTTTRASTPTPVPMTMRAYYGSPSPPRKIA 402

  Fly   147 ----------------------------------------------------------------- 146
                                                                             
Mosquito   403 RHYEPAPPVVFQQPRYTLAHQPKQDLQSMQQQQQSLRQSMYQEDMLEPTALMGHRSQMLPQRQTQ 467

  Fly   147 -VNEQQQQVSNVAQAQ-------------TATQTIEIPAATLLQA-----------TNASQ---- 182
             |.:||||...:.|.|             ...|.:.:|....||.           .|..|    
Mosquito   468 YVQQQQQQQQQLQQYQPQEMSDGLFQQPFRQQQPLMMPLRQPLQQRYHPQPLQPLDMNLGQEDML 532

  Fly   183 VPSQVVAAAAAAAAAQQLQVQHQQQQHHHVQTTQI--------QHIQ---VQSAPPPQQ------ 230
            :|||.|.:|.......::|: |:|.|....|..|:        |.:|   |:.:|..||      
Mosquito   533 LPSQPVQSAQRQQQMMRMQL-HRQWQQLQAQAQQLQDELMDPGQDLQPPLVRQSPTLQQTVQKQQ 596

  Fly   231 ------QQQQQQQQQQQQQQQQQQQQQQSQQQQTTPV---------------QTQHLTITNA--- 271
                  |||..|||.:|.|.||||||::.||||:.|:               |.|..|:..|   
Mosquito   597 SLQSLPQQQSVQQQPRQLQTQQQQQQKEVQQQQSVPIQQPAPLEPPELPLPQQPQCPTVAQAQQP 661

  Fly   272 VALPAASSVKKRKITFSDDDDNMYTTETVDYAVKDEQ---------TIVKT--------AEMTF- 318
            .|.|...:.:|:......|.      :|:|.|..|.|         .:|:|        |:.|. 
Mosquito   662 AAPPQPPAQQKQPQAVPTDQ------QTLDAAQDDFQQPEELLATLQLVRTQPILKPTAAQPTQP 720

  Fly   319 LRGAVKMDIPDYIVGE-----VDDRLSDGA-----------TPQTSQDATTAAAQNVAQYSSE-- 365
            :..|.::.:|.....|     ..:.|.||.           ..|..|.......|.:.|..|:  
Mosquito   721 VVAAEQVLLPQQPASEQHEEVATEELMDGTEVLLEEEEILEPEQQQQQQPQQPEQLLEQCLSQQP 785

  Fly   366 ---------YEILTESEM-------------------------------EEKYQADADNAEIAIE 390
                     .|:|...|:                               ::|.|.:....:..:.
Mosquito   786 KIQDELMKLQELLPSQELLAPQQPPQSEQPAQQRETLRPQPTLQQRLLQKQKLQNELVRPQELLA 850

  Fly   391 MTRLLGTASGTP--------GAG------------------SGQVMEDSGGGSATTGPSTTVSVT 429
            ...||..|...|        .||                  ..|::.|......|...:..|:.|
Mosquito   851 SQELLAPAKTQPTPQQPQRAAAGQSNQLKPLLQFRRPKQHFQAQILVDKLMAKPTQADTVPVAKT 915

  Fly   430 QVKSDSKASGTNAALKPG-SVTVARSSKSGATASAPPAGSD 469
            |.:.|.|.:      |.| :|..|::|||.|::|.....||
Mosquito   916 QSQPDEKGA------KEGKAVPAAQTSKSVASSSGTSQLSD 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB_POZ_BAB-like 31..114 CDD:349624 24/91 (26%)
C2H2 Zn finger 483..512 CDD:275371
C2H2 Zn finger 514..535 CDD:275371
LOC1276418XP_315761.5 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.