DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12236 and zbtb37

DIOPT Version :10

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_004914082.1 Gene:zbtb37 / 100485471 XenbaseID:XB-GENE-979959 Length:583 Species:Xenopus tropicalis


Alignment Length:629 Identity:112/629 - (17%)
Similarity:183/629 - (29%) Gaps:278/629 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QYSLRWNNYLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKEIFKENPHPHPV 70
            :||   |:.|.|    |:..|:.....|:.:.|.|:..:||||||::.|.||::....|  ....
 Frog    78 EYS---NSVLSH----LNQLRMQGRLCDIVVNVQGQSFRAHKVVLAASSPYFRDHMSLN--EMSA 133

  Fly    71 IIFKFIK----FEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQIPVAPLI 131
            :....||    ||.|   :.|.|.|.:.:|...:.|:|..|..|                     
 Frog   134 VSLSVIKNPGVFEQL---LSFCYTGRICLQIADIISYLTAASFL--------------------- 174

  Fly   132 SEHKLIKTIPSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATLLQATNASQVPSQVVAAAAAAAA 196
                                                                             
 Frog   175 ----------------------------------------------------------------- 174

  Fly   197 AQQLQVQHQQQQHHHVQTTQIQ---HIQVQSAPPPQQQQQQQQQQQQQQQQQQQQQQQQSQQQQT 258
                     |.||...:.|||.   |:::.|  |..:::..|.:.:..::.|...:..||..:..
 Frog   175 ---------QMQHIIDKCTQILEGIHLKISS--PESEEELSQSRPKHAERVQDAHRVSQSLSRSL 228

  Fly   259 TPVQTQHLTITNAVALPAASSVKKRKITFSDDDDNMYTTETVDYAVKDEQTIVKTAEMTFLRGAV 323
            :|   :|.|       |.:|..::.:::            ||                       
 Frog   229 SP---RHST-------PRSSGSRRGQVS------------TV----------------------- 248

  Fly   324 KMDIPDYIVGEVDDRLSDGATPQTSQDATTAAAQNVAQYSSEYEILTESEMEEKY--QADADNAE 386
             :||.:....|      :..:||..:..        :...|...||..:...:.|  ...||..|
 Frog   249 -LDIRELSPAE------ESTSPQMVEQG--------SDVESREPILRINRAGQWYVETGSADRGE 298

  Fly   387 IAIEMTRLLGT-------------ASGTPGAGSGQVME-------DSGGGSATTGPSTTVSVTQV 431
            .:.:..|::|.             ....|....|...|       |:.|.||||..|.::.    
 Frog   299 RSDDEVRVMGAMRIKTENLEEWLGPENQPSCEDGSSAEEVTAMVIDTTGHSATTQESYSLG---- 359

  Fly   432 KSDSKASGTNAALKPGSVTVARSSKSG----------ATASAP----------PAGSD------- 469
                 :|||..: :|.|..:.|.|.||          |.:.:|          ..|.|       
 Frog   360 -----SSGTKVS-RPTSSEIDRFSPSGSVVTMTERHRAKSESPRRMEEPKQNSSQGDDAGVIGVS 418

  Fly   470 -------EESVQ-------------------------------YTGLAPLNCSFCGRPLKSVNAL 496
                   |:.|.                               :.|:.|..|..||:.....:.|
 Frog   419 GYVEYLREQEVSERWFRYNPRLTCIYCAKSFNQKGSLDRHMRLHMGITPFVCRMCGKKYTRKDQL 483

  Fly   497 RRHIASRHSEIQGKEHECFICMKSFKTKWSLSTHNSRFHREMGC 540
            ..|| .:|:  ..|...|.:|.|||..:..|:.|..:.|  .||
 Frog   484 EYHI-RKHT--GNKPFHCHVCGKSFPFQAILNQHFRKNH--PGC 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB_POZ_BAB-like 31..114 CDD:349624 26/86 (30%)
C2H2 Zn finger 483..512 CDD:275371 8/28 (29%)
C2H2 Zn finger 514..535 CDD:275371 7/20 (35%)
zbtb37XP_004914082.1 BTB_POZ_ZBTB37 72..194 CDD:349531 40/222 (18%)
C2H2 Zn finger 442..462 CDD:275368 0/19 (0%)
zf-H2C2_2 454..479 CDD:463886 5/24 (21%)
C2H2 Zn finger 470..490 CDD:275368 6/20 (30%)
zf-H2C2_2 483..505 CDD:463886 8/24 (33%)
C2H2 Zn finger 498..516 CDD:275368 7/17 (41%)

Return to query results.
Submit another query.