DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12236 and Btbd18

DIOPT Version :9

Sequence 1:NP_727050.1 Gene:CG12236 / 31523 FlyBaseID:FBgn0029822 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:544 Identity:100/544 - (18%)
Similarity:192/544 - (35%) Gaps:137/544 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YLRHLTYSLDNHRLNDDFVDVSLCVDGRRIKAHKVVLSSCSSYFKE-IFKENPHPHPVIIFKF-- 75
            :||.....|.:.:.:..|.|..|..:|..:.||..:||:||.:|.| :.:|.|.....::.:.  
Mouse    16 FLRVAFLQLHHQQQSGVFCDALLQAEGEAVPAHCCILSACSPFFTERLERERPVQGRKVVLEMGG 80

  Fly    76 IKFEDLNSIIEFMYQGEVNVQQEALQSFLQTAELLAVQGLTAEEKEKPQIPVAPLISEHKLIKTI 140
            :|.:.|..:::|:|..|:.|.||..|..|..|..|.|..|...:.|..::..||           
Mouse    81 LKIQTLRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVSELETLQLEGGKLVKAP----------- 134

  Fly   141 PSTIRAVNEQQQQVSNVAQAQTATQTIEIPAATLLQA-----TNASQVPSQVVAAAAAAAAAQQL 200
                     |.::::.        :.::.|||..:.|     .:..|.|..|....:...|.:..
Mouse   135 ---------QGRRLNR--------ECLQPPAAAPISARVVGPKSRPQTPLPVTQTPSPLGAVRLK 182

  Fly   201 QVQHQQQQHHHVQTTQIQHIQVQSAPPPQQQQQQQQQQQQQQQQQQQQQQQQSQQQQTTPVQTQH 265
            .:..::..|   :.|.:.:  ..|....|.:::.:....|:.:.....|::..::.::.|..|  
Mouse   183 SLGEEEGAH---KKTNLPN--ADSLSDTQLKKKARVCLTQESRSSPSSQREGPKETKSNPGPT-- 240

  Fly   266 LTITNAVALPAA-SSV------KKRKITFSDDDDNMYTT-------------------------- 297
                   |||:. .||      :|.:::.|....::||:                          
Mouse   241 -------ALPSLYPSVDEQLLPRKIRLSRSKPSPHVYTSTPSSILSGPSSMPTAPGRRLWRQRTV 298

  Fly   298 ----ETVD----------YAVKDEQTIVKTAE----MTFLRGAVKMDIPDYIVGEVDDR-LSDGA 343
                :.||          .:..|...:.|.||    ...||......:.:..||.|..| :.:|.
Mouse   299 SKEAQGVDKQKPGEVRPLQSTPDPSDVGKPAENKKQSPELRAPTSSSVEEGQVGRVKLRKIVNGT 363

  Fly   344 TPQTSQDATTAAAQNVAQYSSEYEI----------LTESEMEEKYQADADNAEIAIEMTRLLGTA 398
            ..:..|:......|:..|.....::          :.|.|:..:.|...|:.| :..:..:|.:|
Mouse   364 CWEVVQEPPLRNTQDSPQILEPSDVEEPSGTLLSSVNEQEIPARIQLCQDSPE-SPRLQDILLSA 427

  Fly   399 SGTPGAGSGQVMEDSGGGSATTGPSTTVSVTQVKSDSK---ASGTNAALKPGSVTVARSSKSGAT 460
            |.:|  ....|..:.|.....||..:.:::     |.:   ...|....:|......|.:.:.||
Mouse   428 SHSP--DHPMVKSEFGSSPMLTGKESDLNI-----DCREPYTFDTTLLGQPCEAEQYRITSAAAT 485

  Fly   461 AS--------------APPAGSDE 470
            :.              .||.||.|
Mouse   486 SELEEIFDFMLCGSDVEPPVGSLE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12236NP_727050.1 BTB 22..116 CDD:279045 28/96 (29%)
BTB 33..116 CDD:197585 26/85 (31%)
Herpes_capsid <376..467 CDD:283714 19/107 (18%)
C2H2 Zn finger 483..512 CDD:275371
C2H2 Zn finger 514..535 CDD:275371
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 33/137 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 25/175 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394 2/23 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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