DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4020 and FAR1

DIOPT Version :9

Sequence 1:NP_001259264.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_011518702.1 Gene:FAR1 / 84188 HGNCID:26222 Length:518 Species:Homo sapiens


Alignment Length:511 Identity:171/511 - (33%)
Similarity:275/511 - (53%) Gaps:26/511 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYE 65
            ::|||.:|.:.:.:|||:||:||.|:|||||||||:..:|||:|.|.|.|.:||::.....:|::
Human     2 VSIPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFD 66

  Fly    66 RLRREQPNARSKLVAIAGDVEQLGLGIGSADLE-RLRNVNIVYHSAASVRFDDALSTAILLNTRG 129
            |||.|.|:.|.|::||..::.|..|.:...|.| .:.:.||::|.||:|||::.|..|:.||...
Human    67 RLRDENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIA 131

  Fly   130 THELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFNLKY 194
            |.:|:.||.:...|:.|:||||.|:......::|.||||..|.:..|...|..|..:::....|.
Human   132 TRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKL 196

  Fly   195 GNFQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVACGVGI 259
            ...:||||.:||:|||.||.:...:|.:.|.|||||.::.:||.|||.||||||:||.:|.|.||
Human   197 IGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGI 261

  Fly   260 LRSQNCDPNIVADFVPADIVARTLITSVYKFMGESKSRAKDSDLYVVNCATANISPITMGEV-ID 323
            ||:.....|.:||.||.|:|....:.:.: :.|.:: ..:..::.|.||.|.:.:|...||| ..
Human   262 LRTIRASNNALADLVPVDVVVNMSLAAAW-YSGVNR-YMRPRNIMVYNCTTGSTNPFHWGEVEYH 324

  Fly   324 IGKTFIRKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPFLMKLQRRIF 388
            :..|| ::||.|:....|...:|:..:|:.......|...|.:.|..||:....|.:||...|:.
Human   325 VISTF-KRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTITRLH 388

  Fly   389 AAFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINYTEFFQHGIRGAKEFLLKES 453
            .|...|:.|....|.:..:|...|.:.:...:...|. :....:::.|:.::...|.|:::|.|.
Human   389 KAMVFLEYFTSNSWVWNTENVNMLMNQLNPEDKKTFN-IDVRQLHWAEYIENYCLGTKKYVLNEE 452

  Fly   454 PESSSAARFRV-------------------KIFYVLDFLCRGIVYSFLLRLIFRFL 490
            .....|||..:                   :||.....:.|.|.| |::.|.::||
Human   453 MSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWY-FVVSLCYKFL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4020NP_001259264.1 FAR-N_SDR_e 12..333 CDD:187547 128/322 (40%)
FAR_C 359..450 CDD:176924 19/90 (21%)
FAR1XP_011518702.1 PLN02996 2..449 CDD:215538 157/450 (35%)
FAR-N_SDR_e 11..333 CDD:187547 128/324 (40%)
Sterile 360..450 CDD:281068 19/90 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157526
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.850

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