DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4020 and CER4

DIOPT Version :9

Sequence 1:	NP_001259264.1	Gene:	CG4020 / 31522	FlyBaseID:	FBgn0029821	Length:	494	Species:	Drosophila melanogaster
Sequence 2:	NP_567936.5	Gene:	CER4 / 829521	AraportID:	AT4G33790	Length:	493	Species:	Arabidopsis thaliana

Alignment Length:	481	Identity:	123/481 - (25%)
Similarity:	207/481 - (43%)	Gaps:	82/481 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MTIPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQ-WESRLY 64
            :::.:..:::.|.|.||:||:....:||:||..|.:.::|:|:|..||.:..:|...: .:..|:
plant     8 VSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFNDEILKKDLF 72

  Fly    65 ERLRREQ-PN----ARSKLVAIAGDVEQLGLGIGSADL--ERLRNVNIVYHSAASVRFDDALSTA 122
            :.|:.:. ||    ...|:..:.||:....||:...||  |.:..|:.:.:.||:.:||:....|
plant    73 KVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLAATTKFDERYDVA 137

  Fly   123 ILLNTRGTHELVKLALEWPKLKAFVHVSTTY---------------------SNPGV-LEVEERV 165
            :.:||.|...::..|....|:|..|||||.|                     ...|: :..|:::
plant   138 LGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRMGETLNGTTGLDINYEKKL 202

  Fly   166 YPPLADWRTTIKLAETYDAEILDIFNLK----YGNFQPNTYTFTKSLAEQVVNEYRDRLPIFIFR 226
            .....|....|..|.....|.:....|:    ||  .||||.|||::.|.:|...|:.|.:.:.|
plant   203 VQEKLDQLRVIGAAPETITETMKDLGLRRAKMYG--WPNTYVFTKAMGEMMVGTKRENLSLVLLR 265

  Fly   227 PSIVVSTIEEPVPGWADNFNGPTGLLVACGVGILRSQNCDPNIVADFVPADIVARTLITSVYKFM 291
            |||:.||.:||.|||.:.......|.|..|.|.|....||.:.|:|.:|||:|..:::.|:....
plant   266 PSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILVSMAAQA 330

  Fly   292 GESKSRAKDSDLYVVNCATAN----------------ISPIT--MGEVIDIGKTFIRKNPFEKTL 338
            |:     ::..:|.|..:..|                |.|.|  .|:|:.:|...|..:
plant   331 GK-----QEEIIYHVGSSLRNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEILSS------ 384

  Fly   339 WLPGGGMTTCPVLHFVRFCTMHLLMAI----VVDTLLRLYNEKPF--LMKLQRRIFAAFSALQVF 397
                       :..|.|:.|:..|:|:    :|:.:|....||.|  ..|....||......|.:
plant   385 -----------MRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNKKINFIFRLVDLYQPY 438

  Fly   398 AMTEWHFQNDNFRALHDVVPANEVSN 423
            ......|.:.|...|..:|....|.|
plant   439 LFFYGIFDDSNTEKLRKMVSKTGVEN 464

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4020	NP_001259264.1	FAR-N_SDR_e	12..333	CDD:187547	103/372 (28%)
CG4020	NP_001259264.1	FAR_C	359..450	CDD:176924	17/71 (24%)
CER4	NP_567936.5	PLN02996	6..493	CDD:215538	123/481 (26%)
		FAR-N_SDR_e	17..365	CDD:187547	97/354 (27%)
		Sterile	396..493	CDD:281068	17/69 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	159	1.000	Domainoid score	I1277
eggNOG	1	0.900	-	-		E1_COG3320
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	182	1.000	Inparanoid score	I1437
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D815047at2759
OrthoFinder	1	1.000	-	-		FOG0000172
OrthoInspector	1	1.000	-	-		mtm964
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11011
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X145
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	12	11.930