DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4020 and CG34342

DIOPT Version :9

Sequence 1:NP_001259264.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001097509.3 Gene:CG34342 / 5740152 FlyBaseID:FBgn0085371 Length:572 Species:Drosophila melanogaster


Alignment Length:506 Identity:156/506 - (30%)
Similarity:259/506 - (51%) Gaps:25/506 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERL 67
            :.:.:.:..:.:||.:|||||.|.||||||. .|.:||:|:|.|...:::|||:..:...::.|:
  Fly    70 VTDFYSNATVLITGGTGFVGKVLTEKLLRSF-GLRKIYMLIRSKDNMSVQERLKGFFNESIFNRM 133

  Fly    68 RREQPNARSKLVAIAGDVEQLGLGIGSADLERLRN-VNIVYHSAASVRFDDALSTAILLNTRGTH 131
            |.|.|...:|:..|..|...:.|.|.|||...|.: |.||::..|||:|::.||.||.:|..||.
  Fly   134 REESPQLLAKVHPIRADYSAIDLDIDSADRAMLSSEVQIVFNVVASVKFNEKLSDAIDINVLGTK 198

  Fly   132 ELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFNLKYGN 196
            :::.|.:|...||:|||:||.|.|.....::|:||.....:...:::..|:|.|.|:........
  Fly   199 KILDLVMEMKHLKSFVHISTLYCNCNRKFIKEQVYENEIGYEKIMQIYRTFDDETLEKMRHCLIG 263

  Fly   197 FQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVACGVGILR 261
            ..|||||.||..||.:||.....:|..||||.||:||.::|.|||.||..||:||......|::|
  Fly   264 QMPNTYTMTKKCAENLVNHRAFHMPAGIFRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSARGLVR 328

  Fly   262 SQNCDPNIVADFVPADIVARTLITSVYKF-----MGESKSRAKDSDLYVVNCATANISPITMGEV 321
            ......:..|:.||||.|...:|.:.:..     :.|||...| |:|.|.| ..::.:.||.|:.
  Fly   329 CIYGKASCKANMVPADYVVNAMIATAWDIARRFKLRESKVDGK-SELPVYN-YVSDANNITWGQY 391

  Fly   322 IDIGKTFIRKNPFEKTLW------LPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPFL 380
            :.:.:....: ||:|.||      :|...: .|.:..|     :|.:.|.::|.:..:..:|...
  Fly   392 MHLSRKGFHE-PFDKALWCFSYVIIPSKPL-HCAIAFF-----LHNIPAYILDLIAMVTGQKRIY 449

  Fly   381 MKLQRRIFAAFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINYTEFFQHGIRGA 445
            .|...:|......:..|.:.||.|.:.|...|::::|..|.|...| ..|.||::|:|:..:.|.
  Fly   450 AKAYGKISRIIDMMAWFGLKEWKFAHRNIDELNELLPREERSVLQF-NIATINWSEYFRSYLSGI 513

  Fly   446 KEFLLKESPESSSAARFRV--KIFYVLDFLCRGIVYSFLLRLIFRFLVRLW 494
            :.:..|:|...:...:.|.  :...:|..|.:......|:..:.|..:|::
  Fly   514 RRYFFKDSANDNKLQQRRTIYRRMLILHTLLKTTFGLSLIMCMLRVYLRIF 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4020NP_001259264.1 FAR-N_SDR_e 12..333 CDD:187547 118/326 (36%)
FAR_C 359..450 CDD:176924 22/90 (24%)
CG34342NP_001097509.3 PLN02996 70..519 CDD:215538 148/459 (32%)
FAR-N_SDR_e 78..397 CDD:187547 118/321 (37%)
Sterile 429..519 CDD:281068 22/90 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466785
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
99.000

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