DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4020 and CG8303

DIOPT Version :10

Sequence 1:NP_572276.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_611141.3 Gene:CG8303 / 36858 FlyBaseID:FBgn0034143 Length:543 Species:Drosophila melanogaster


Alignment Length:524 Identity:152/524 - (29%)
Similarity:252/524 - (48%) Gaps:53/524 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYE 65
            :||||.|..:.|||||.:||:|..|||.||.:.|.:|.||||:|.|:.....||::...:..::|
  Fly    37 LTIPEFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKRKFDPNERIRRLLQKPIFE 101

  Fly    66 RLRREQPNARSKLVAIAGDVEQLGLGIGSADLERL-RNVNIVYHSAASVRFDDALSTAILLNTRG 129
            :...:   ..||:|.:.|::.:...|.|...|:.| ..||::|||||:::|...|.|||..|..|
  Fly   102 KYSEK---TLSKVVPVVGELSEPNFGFGPELLQELIDRVNVIYHSAATIKFSSPLRTAIRTNLTG 163

  Fly   130 THELVKLALEWPKLKAFVHVSTTY---SNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFN 191
            |...::||.:..:|.|:::.||.:   :|.|:  :.|.||....|....:|:||. |:...|..:
  Fly   164 TMRTIELAKQLKQLAAYIYCSTAFCNSNNRGL--IAEEVYKSQFDPYEMMKMAED-DSAWEDFTD 225

  Fly   192 LK---YGNFQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFN-GPTGLL 252
            .|   |....||||||||:|:|.::......||..|.|||||..|:|.|:.||..|.| |..|.|
  Fly   226 QKCKGYIRDHPNTYTFTKNLSENLLMAEMSGLPAAIVRPSIVYGTLEHPMKGWVGNANSGHLGFL 290

  Fly   253 VACGVGILRSQNCDPNIVADFVPADIVARTLITSVYKFMGESKSRAKDSDLYVVNCATANISPIT 317
            .....||.|:...:.|.|.|.:|.|.|..:.:...: ::|..|....:    :::|.:..::|:.
  Fly   291 AGFVKGIFRTMCGNANAVIDIIPCDYVINSSLVMGW-YVGTRKLEQPE----IIHCTSGEVNPLN 350

  Fly   318 MGEVIDIGKTFIRKNPFEKTLWLP-----GGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEK 377
            :.|...|....:.::|....:|.|     .|....   |.|..|   |||.|:|.     :..||
  Fly   351 LAEFCTIINDSVERHPPNSFVWKPVTKLRNGWRYN---LFFYLF---HLLPAMVF-----IIPEK 404

  Fly   378 PFLMKLQR-------RIF-AAFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINY 434
            .|.:.:.:       |:| ....|...|...::.:...|...:..::|.::...:.| ..:..::
  Fly   405 LFGIGMPQHTAYEYMRVFQKGTKAFDYFLDKDFRYSLKNALRISALIPESDRRRYNF-DASQCDW 468

  Fly   435 TEFFQHGIRGAKEFLLKESPESSSAARFRVKIFYVLDFLCRGIVYSFL---------LRLIFRFL 490
            :||....:.|.:.|..|||..::...|...|:|.||.:....::::.|         |::.....
  Fly   469 SEFIDRCLIGIRRFYFKESAVTTDWHRNYWKVFNVLYYAGYVVIFAVLYFALTLTLGLQIGLTLA 533

  Fly   491 VRLW 494
            |.:|
  Fly   534 VLIW 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4020NP_572276.1 FAR-N_SDR_e 12..333 CDD:187547 109/328 (33%)
Sterile 359..451 CDD:460779 19/99 (19%)
CG8303NP_611141.3 FAR-N_SDR_e 46..366 CDD:187547 109/330 (33%)
Sterile 391..485 CDD:460779 20/102 (20%)

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