DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4020 and CG8306

DIOPT Version :9

Sequence 1:NP_001259264.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster


Alignment Length:467 Identity:152/467 - (32%)
Similarity:257/467 - (55%) Gaps:4/467 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERL 67
            |.:.:..:.:|:|||:||||..::|||||..|.:|.:|:|||.|||.:::|||:...::.::::.
  Fly     6 ITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFDKF 70

  Fly    68 RREQPNAR-SKLVAIAGDVEQLGLGIGSADLERL-RNVNIVYHSAASVRFDDALSTAILLNTRGT 130
            :..|..:| ||:|.|.|||....|||...|.:.| .|||:|:||||::.|..:|.....:|.|||
  Fly    71 KELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNINLRGT 135

  Fly   131 HELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFNLKYG 195
            ..:|:|..:...|.|.||||:.|.|..:.:|||::||...|....|:|:||.:.:.|.....|..
  Fly   136 RRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPKLL 200

  Fly   196 NFQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVACGVGIL 260
            ...||||||||.|||..|.....:.|..|.|||::.:..:||:|||..:.|||.|..:....|:|
  Fly   201 KDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGASKGVL 265

  Fly   261 RSQNCDPNIVADFVPADIVARTLITSVYKFMG-ESKSRAKDSDLYVVNCATANISPITMGEVIDI 324
            |....||:|:.|::|.|:|...:||:.|.... ::|:..:.:||.:.:..::...|.....:.|.
  Fly   266 RRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFRFELMTDK 330

  Fly   325 GKTFIRKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPFLMKLQRRIFA 389
            ..:::...|....:|.|...:.....:..:.....|.:.||::|.:.::...:|.|::|.:.::.
  Fly   331 INSYLHDYPLNSAVWYPNLRLVKSLWVFRLSAILFHFIPAIILDLVTKIGGGRPILVRLHKNVWN 395

  Fly   390 AFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINYTEFFQHGIRGAKEFLLKESP 454
            :.:.|:.|..|||||.:....||...:...:...| |:....:.:.|:|.:.|.|.:::|.||..
  Fly   396 SLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKF-FIDIGELAWDEYFSNTILGVRQYLSKEPI 459

  Fly   455 ESSSAARFRVKI 466
            ::...||.:.||
  Fly   460 KNLEKARRKDKI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4020NP_001259264.1 FAR-N_SDR_e 12..333 CDD:187547 119/323 (37%)
FAR_C 359..450 CDD:176924 22/90 (24%)
CG8306NP_611140.3 PLN02996 6..456 CDD:215538 146/450 (32%)
FAR-N_SDR_e 13..339 CDD:187547 119/325 (37%)
FAR_C 364..454 CDD:176924 22/90 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466810
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
109.900

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