DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4020 and CG8306

DIOPT Version :10

Sequence 1:NP_572276.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_611140.3 Gene:CG8306 / 36857 FlyBaseID:FBgn0034142 Length:516 Species:Drosophila melanogaster


Alignment Length:467 Identity:152/467 - (32%)
Similarity:257/467 - (55%) Gaps:4/467 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERL 67
            |.:.:..:.:|:|||:||||..::|||||..|.:|.:|:|||.|||.:::|||:...::.::::.
  Fly     6 ITDFYAGRNVFITGATGFVGVTIVEKLLRDVPNVGTLYLLMRAKKGKSVQERLEELKKNSVFDKF 70

  Fly    68 RREQPNAR-SKLVAIAGDVEQLGLGIGSADLERL-RNVNIVYHSAASVRFDDALSTAILLNTRGT 130
            :..|..:| ||:|.|.|||....|||...|.:.| .|||:|:||||::.|..:|.....:|.|||
  Fly    71 KELQLQSRLSKIVPIEGDVGLEHLGISPKDRQTLIDNVNVVFHSAATLDFFQSLKETTNINLRGT 135

  Fly   131 HELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLADWRTTIKLAETYDAEILDIFNLKYG 195
            ..:|:|..:...|.|.||||:.|.|..:.:|||::||...|....|:|:||.:.:.|.....|..
  Fly   136 RRVVELCQQIKNLDALVHVSSAYVNAYLTKVEEKLYPAPEDPEKIIQLSETLNDDALKELEPKLL 200

  Fly   196 NFQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTGLLVACGVGIL 260
            ...||||||||.|||..|.....:.|..|.|||::.:..:||:|||..:.|||.|..:....|:|
  Fly   201 KDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAWKEPIPGWTISKNGPQGFFMGASKGVL 265

  Fly   261 RSQNCDPNIVADFVPADIVARTLITSVYKFMG-ESKSRAKDSDLYVVNCATANISPITMGEVIDI 324
            |....||:|:.|::|.|:|...:||:.|.... ::|:..:.:||.:.:..::...|.....:.|.
  Fly   266 RRLPLDPSIIMDYIPIDVVVNGIITTGYYVNSLQAKNGGRPADLQIFHLTSSTYKPFRFELMTDK 330

  Fly   325 GKTFIRKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPFLMKLQRRIFA 389
            ..:::...|....:|.|...:.....:..:.....|.:.||::|.:.::...:|.|::|.:.::.
  Fly   331 INSYLHDYPLNSAVWYPNLRLVKSLWVFRLSAILFHFIPAIILDLVTKIGGGRPILVRLHKNVWN 395

  Fly   390 AFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINYTEFFQHGIRGAKEFLLKESP 454
            :.:.|:.|..|||||.:....||...:...:...| |:....:.:.|:|.:.|.|.:::|.||..
  Fly   396 SLNTLEKFIFTEWHFDSKRLLALSKTLNIVDKKKF-FIDIGELAWDEYFSNTILGVRQYLSKEPI 459

  Fly   455 ESSSAARFRVKI 466
            ::...||.:.||
  Fly   460 KNLEKARRKDKI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4020NP_572276.1 FAR-N_SDR_e 12..333 CDD:187547 119/323 (37%)
Sterile 359..451 CDD:460779 23/91 (25%)
CG8306NP_611140.3 FAR-N_SDR_e 13..339 CDD:187547 119/325 (37%)
Sterile 365..456 CDD:460779 23/91 (25%)

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