DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4020 and CG1441

DIOPT Version :10

Sequence 1:NP_572276.1 Gene:CG4020 / 31522 FlyBaseID:FBgn0029821 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster


Alignment Length:499 Identity:178/499 - (35%)
Similarity:284/499 - (56%) Gaps:27/499 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IPEAFEDQEIFVTGASGFVGKALIEKLLRSCPKLGRIYVLMRPKKGHTIEERLQLQWESRLYERL 67
            |.|.|:.:.:|:||.:||:||.|:|||||||..|.|||:|:|||||...:||::..:::.|::::
  Fly    28 IAECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDIFQNVLFDQV 92

  Fly    68 R--REQPNARSKLVAIAGDVEQLGLGIGSADLERLR-NVNIVYHSAASVRFDDALSTAILLNTRG 129
            :  |.:.:...::|||||||...||||...|||.|| .|:||||.||:||||:.|..|:.:||||
  Fly    93 KQMRGEEHILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDEPLRNAVFMNTRG 157

  Fly   130 THELVKLALEWPKLKAFVHVSTTYSNPGVLEVEERVYPPLAD---------WRTTIKLAETYDAE 185
            |..:::|||....|..|.:.||.|.:..|..:.|:.|.|.||         |.|..::| |.:.:
  Fly   158 TKYMLELALTLKHLDFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQACEWLTDDEVA-TIERK 221

  Fly   186 ILDIFNLKYGNFQPNTYTFTKSLAEQVVNEYRDRLPIFIFRPSIVVSTIEEPVPGWADNFNGPTG 250
            :|...        ||||.:||||||.:|.|..:.||..|.|||||:...:||:|||.||.|||||
  Fly   222 VLGAI--------PNTYAYTKSLAEALVVEKFEELPAVILRPSIVIPIWKEPIPGWTDNINGPTG 278

  Fly   251 LLVACGVGILRSQNCDPNIVADFVPADIVARTLITSVYKFMGESKSRAKDSDLYVVNCATANISP 315
            ||:..|.|::|:..|:.:...||:|.|:....::.:.::    :.:...|....|.:..::|...
  Fly   279 LLIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILVASWR----NITAGTDKTNRVAHMTSSNDIK 339

  Fly   316 ITMGEVIDIGKTFI-RKNPFEKTLWLPGGGMTTCPVLHFVRFCTMHLLMAIVVDTLLRLYNEKPF 379
            ::..|:|::|:..| .|.|.....|.|||.|.:...:||:.......:.|:.||.||.:....|.
  Fly   340 VSWAEIIELGRWVIENKVPLNGVAWYPGGSMKSNYWVHFICMVLFQWMPALFVDALLWILRYPPV 404

  Fly   380 LMKLQRRIFAAFSALQVFAMTEWHFQNDNFRALHDVVPANEVSNFGFMQHANINYTEFFQHGIRG 444
            |.::|.||:..|...:.:|...|:|.|.....|..::...|...: .::...::..::|.:.:..
  Fly   405 LCRVQNRIYKGFEVFEYYANNVWNFDNSEAVKLRKLMNNKERRTY-VIEKIELDLIDYFTNCVLC 468

  Fly   445 AKEFLLKESPESSSAARFRVKIFYVLDFLCRGIVYSFLLRLIFR 488
            |:..:||||.||..|||..:|:.:|:|.:.:||....:|.:::|
  Fly   469 ARRLILKESDESIPAARRHMKVMWVVDKVYKGIWIFGILYMLYR 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4020NP_572276.1 FAR-N_SDR_e 12..333 CDD:187547 132/333 (40%)
Sterile 359..451 CDD:460779 19/91 (21%)
CG1441NP_610535.1 FAR-N_SDR_e 35..348 CDD:187547 129/325 (40%)
Sterile 384..475 CDD:460779 19/91 (21%)

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