DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act5C and ARP3

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_012599.3 Gene:ARP3 / 853528 SGDID:S000003826 Length:449 Species:Saccharomyces cerevisiae


Alignment Length:438 Identity:156/438 - (35%)
Similarity:233/438 - (53%) Gaps:79/438 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFP--------------SIVGRP-----------------RH 41
            |:|:|||:|:.|.||||:|:|..|||              |.||.|                 ..
Yeast     8 AVVMDNGTGLTKLGFAGNDSPSWVFPTAIATAAPSNTKKSSGVGAPSAVSNEASYFGNSTSATNF 72

  Fly    42 QGVMVGM------GQK-----DSYVGDEA--QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
            .|...|:      |::     |.|:|:||  .|:....:|.|||.||.|.|||.||:.|.::.:.
Yeast    73 NGATGGLLSNNLSGKRGTEDLDFYIGNEALVASQGPSYSLSYPIRHGQVENWDHMERFWENSIFK 137

  Fly    94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------T 150
            .||..||:|..||||.||||..|||::.:|.||:||...:|:|:||||:|.||..:        |
Yeast   138 YLRTEPEDHFFLLTEPPLNPPENREQVAEIFFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLT 202

  Fly   151 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT--TAEREIVRDI 213
            |.|:||||||:|.:|:.|||.:..||..:.:||||:|.::..:|.|||.:.|:  |||:     |
Yeast   203 GTVIDSGDGVTHVIPVAEGYVIGSAIKNIPIAGRDITLFIQSLLRERGEADTSLRTAEK-----I 262

  Fly   214 KEKLCYVALDFEQEMATAASSSS-----LEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAC 273
            |::.|||..|..:|........|     :.::.|....:|:.||.|||..||..|.|.....:..
Yeast   263 KQEYCYVCPDIVKEFNKFDKDPSKFAQFVVENQEKTRRKVVDIGYERFLAPEIFFNPEIASSDFL 327

  Fly   274 GIHETTYN-SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-------------APS 324
            ....|..: :|..|.:|:||.||.|.|||||:||:.....|:|:::.::             ..|
Yeast   328 TPLPTVVDQTIQACPIDVRKGLYNNIVLSGGSTMFKDFGRRLQRDLKSIVNNRIAQSELLSGTKS 392

  Fly   325 T-MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 371
            | :.:.:|:..:::.:||.|||:||..:.|:....:|::|:|.||.||
Yeast   393 TGVDVSVISHRKQRNAVWFGGSLLAQTAEFKGYCHTKKDYEEYGPEIV 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 156/438 (36%)
ARP3NP_012599.3 COG5277 1..445 CDD:227602 156/438 (36%)
PTZ00280 5..446 CDD:240343 156/438 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.