DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and ARP4

DIOPT Version :10

Sequence 1:NP_511052.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_012454.1 Gene:ARP4 / 853364 SGDID:S000003617 Length:489 Species:Saccharomyces cerevisiae


Alignment Length:486 Identity:127/486 - (26%)
Similarity:192/486 - (39%) Gaps:140/486 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK------ 62
            :||:|:|:|.||.....|::|.|.|:::.||:.|:               |..||...|      
Yeast    12 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGK---------------YTADEGNKKIFSEQS 61

  Fly    63 ----RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQ 122
                |....||..||:|:|.:||..::.|.....|||.:..... |.||||...|...||:|..:
Yeast    62 IGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLE 126

  Fly   123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
            ::.|.....|.|:|..:....:|:||...:|:|.|.......||.:|..|..:..|..:||:.:.
Yeast   127 VLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFIN 191

  Fly   188 DYLMKILTERG---------------------------YSFTTTAEREIVRDIKEKLCYVALDFE 225
            ..:.|.|..:.                           |.:..  .|...::.||.||::.....
Yeast   192 HLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYAN--NRGFFQECKETLCHICPTKT 254

  Fly   226 QEMATAASSSSLEKSYELPDGQVITIGNE-RFRCPEALFQP-----------SFLGM-------- 270
            .|......||:.::|.|.|..:.|...|| |:...|.||.|           |..|:        
Yeast   255 LEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDY 319

  Fly   271 -------------------------------------------------------------EACG 274
                                                                         |..|
Yeast   320 VPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIG 384

  Fly   275 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ER 336
            :.:..|:|||..|||:|..|..|.||:|||:..||::||:..|:..:.|| :|.:|:...   ||
Yeast   385 LADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPS-LKFRILTTGHTIER 448

  Fly   337 KYSVWIGGSILASLSTFQQMWISKQEYDESG 367
            :|..|:|||||.||.||.|:|:.|:||:|.|
Yeast   449 QYQSWLGGSILTSLGTFHQLWVGKKEYEEVG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_511052.1 ASKHA_NBD_actin 7..371 CDD:466823 125/483 (26%)
ARP4NP_012454.1 ASKHA_NBD_Arp4_ACTL6-like 11..479 CDD:466846 126/484 (26%)

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