DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and Actb

DIOPT Version :10

Sequence 1:NP_511052.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_112406.1 Gene:Actb / 81822 RGDID:628837 Length:375 Species:Rattus norvegicus


Alignment Length:374 Identity:367/374 - (98%)
Similarity:374/374 - (100%) Gaps:0/374 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
            |:::|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66

  Fly    68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 131

  Fly   133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
            |||||||||||||||||||||:||||||:||||||||||||||||||||||||||||||||||||
  Rat   132 MYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 196

  Fly   198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 262
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   197 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 261

  Fly   263 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
            |||||||||:|||||||:|||||||||||||||||||||||||||||||||||||||||||||||
  Rat   262 FQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 326

  Fly   328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            |||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   327 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_511052.1 ASKHA_NBD_actin 7..371 CDD:466823 359/363 (99%)
ActbNP_112406.1 ASKHA_NBD_actin 6..370 CDD:466823 359/363 (99%)

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