DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and Acta2

DIOPT Version :10

Sequence 1:NP_511052.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_112266.1 Gene:Acta2 / 81633 RGDID:621676 Length:377 Species:Rattus norvegicus


Alignment Length:377 Identity:355/377 - (94%)
Similarity:365/377 - (96%) Gaps:1/377 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDEE-VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            ||:|| ..|||.|||||:|||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65

  Fly    65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
            ||||||||||||:||||||||||||:|||||||||||||.|||||||||||||||||||||||||
  Rat    66 ILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130

  Fly   130 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
            .||||||||||||||||||||||||||||||:|.|||||||||||||:|||||||||||||||||
  Rat   131 VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195

  Fly   195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 259
            |||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
  Rat   196 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCP 260

  Fly   260 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
            |.||||||:|||:.||||||||||||||:|||||||||.||||||||||||||||||||||||||
  Rat   261 ETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPS 325

  Fly   325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            |||||||||||||||||||||||||||||||||||||||||:||||||||||
  Rat   326 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_511052.1 ASKHA_NBD_actin 7..371 CDD:466823 344/363 (95%)
Acta2NP_112266.1 ASKHA_NBD_actin 8..372 CDD:466823 344/363 (95%)

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