DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and si:ch211-241j12.3

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_017207998.2 Gene:si:ch211-241j12.3 / 566552 ZFINID:ZDB-GENE-040724-72 Length:1245 Species:Danio rerio


Alignment Length:370 Identity:195/370 - (52%)
Similarity:269/370 - (72%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|:|:|||:.|||||..|.|.||||:::|||:::.||.....::.|||.:||..||:|||:|||.
Zfish   881 IVLDSGSGLMKAGFADQDLPAAVFPTVIGRPKYEEVMNSCVDRELYVGHDAQHMRGVLTLRYPIR 945

  Fly    74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
            ||:|:|||:||.:|.|.| ..|..|||:||||||||.|||..||::|.::|||.|:.|..:||:|
Zfish   946 HGVVSNWDEMEMLWTHAF-QLLSAAPEDHPVLLTEAALNPLQNRQRMVELMFEAFSVPLTFVAVQ 1009

  Fly   139 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
            |||:|||||||||:||||||||||:||::|||.||||:.||||||.|:|..|.|:|.|.|....|
Zfish  1010 AVLALYASGRTTGVVLDSGDGVSHSVPVFEGYCLPHAVQRLDLAGADVTLQLQKLLLESGVCLRT 1074

  Fly   204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 268
            :||.||||::||:.|:|::|:|.||    .||..|..|.||||..:.:.::|||.||.||:|..:
Zfish  1075 SAELEIVREMKERCCFVSVDYEAEM----KSSESEIQYTLPDGHTVPLASQRFRAPEILFRPELI 1135

  Fly   269 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKII 331
            |.:..|:||:.:.||::.|:|:|:....|.:||||.|:..|:|:|:|.|:.|:.|..:.  :::.
Zfish  1136 GRDHYGLHESVFRSILQSDLDLRRSFVGNILLSGGNTLLSGLAERLQLEVRAMVPLDLSACVRVS 1200

  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            :||:|.:|||.||:.||||...|..|||..||:|.||.||.||||
Zfish  1201 SPPDRDFSVWSGGAALASLPEQQSAWISAAEYEEFGPQIVFRKCF 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 193/368 (52%)
si:ch211-241j12.3XP_017207998.2 Neuromodulin_N <411..625 CDD:331332
ACTIN 878..1245 CDD:214592 193/368 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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