DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and Actr1a

DIOPT Version :10

Sequence 1:NP_511052.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_058556.1 Gene:Actr1a / 54130 MGIID:1858964 Length:376 Species:Mus musculus


Alignment Length:370 Identity:197/370 - (53%)
Similarity:279/370 - (75%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:..||:|:::||:|
Mouse    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSIRYPME 76

  Fly    74 HGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            ||||.:|:|||:||.:.: .::|:...||||||||||||||:.|||:..::.|||||.||:::::
Mouse    77 HGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISM 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:||||||||:|.||||||:|:||:|:|:|:||||::.:|...|.:.||.|.
Mouse   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFH 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDGQVITIGNERFRCPEALFQPS 266
            :::|.|||:.|||:.||::::.:::     .:...||: |.||||..|.||..|||.||.||:|.
Mouse   207 SSSEFEIVKAIKERACYLSINPQKD-----ETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPD 266

  Fly   267 FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
            .:|.|:.||||....:|.|.|:|:|:.|::|.|||||:|::.|..||:..|:..|||..:||:|.
Mouse   267 LIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRIS 331

  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
Mouse   332 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_511052.1 ASKHA_NBD_actin 7..371 CDD:466823 193/363 (53%)
Actr1aNP_058556.1 ASKHA_NBD_Arp1 9..375 CDD:466820 195/367 (53%)

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