DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and actr3

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_989368.1 Gene:actr3 / 394999 XenbaseID:XB-GENE-5915063 Length:418 Species:Xenopus tropicalis


Alignment Length:416 Identity:151/416 - (36%)
Similarity:218/416 - (52%) Gaps:55/416 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            |.|||.|:|..|.|:||:..|:.:.||.        ||....:.:|.|:...|.::||||..|..
 Frog     7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRLMKGVDDLDFHIGDEAIDKPT 71

  Fly    65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
            ..| |:||.||||.:||.||:......:..||..||:|..||||.|||...|||...:||||:||
 Frog    72 YAT-KWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFN 135

  Fly   130 TPAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 186
            .|.:|:|:||||:|.||       .|| ||.|:||||||:|.:|:.|||.:...|..:.:||||:
 Frog   136 VPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 200

  Fly   187 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA-------------TAASSSSLE 238
            |.::.::|.:|..........|..:.:||:..||..|..:|.:             |..::.| :
 Frog   201 TYFIQQLLRDREVGIPPEQSLETAKAVKERFSYVCPDLVKEFSKYDTDGAKWIKQYTGVNAVS-K 264

  Fly   239 KSYELPDGQVITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
            |.:.      |.:|.|||..||..|.|.|...: ...|.|.....|..|.:|:|:.||.|.||||
 Frog   265 KEFS------IDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSG 323

  Fly   303 GTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351
            |:||:.....|:|:::.                .|.|..:.:::|....::|:||.|||:|||..
 Frog   324 GSTMFRDFGRRLQRDVKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTP 388

  Fly   352 TFQQMWISKQEYDESGPSIV-HRKCF 376
            .|.|:..:|::|:|.||||. |...|
 Frog   389 EFYQVCHTKKDYEEIGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 150/414 (36%)
actr3NP_989368.1 PTZ00280 2..417 CDD:240343 151/416 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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