DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and Actr1b

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001034117.2 Gene:Actr1b / 316333 RGDID:1307380 Length:376 Species:Rattus norvegicus


Alignment Length:370 Identity:200/370 - (54%)
Similarity:277/370 - (74%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:..||:||::||:|
  Rat    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYPME 76

  Fly    74 HGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            ||:|.:|:|||:||.:.: .::|:...||||||||||||||..||||..::.|||||.||:::::
  Rat    77 HGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISM 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:||||||||:|.||||||:|:||:|:|:|:||||::.||..:|.:.|..|.
  Rat   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFH 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK-SYELPDGQVITIGNERFRCPEALFQPS 266
            |:||.|:||.|||:.||::::.:::.|.     ..|| .|.||||..:.:|..|||.||.||||.
  Rat   207 TSAEFEVVRTIKERACYLSINPQKDEAL-----ETEKVQYTLPDGSTLDVGPARFRAPELLFQPD 266

  Fly   267 FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
            .:|.|:.|:||....:|.|.|:|:|:.|::|.|||||:|::.|..||:..|:..|||..:||||.
  Rat   267 LVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKIS 331

  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
  Rat   332 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 199/368 (54%)
Actr1bNP_001034117.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 199/368 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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