DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and Actl11

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001019959.2 Gene:Actl11 / 316000 RGDID:1310036 Length:1218 Species:Rattus norvegicus


Alignment Length:370 Identity:152/370 - (41%)
Similarity:225/370 - (60%) Gaps:21/370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            :::||:|:|.|:|..|.|.|.::...:|.||.|...:|.    ..||....|.:..:....:|  
  Rat   867 QKMAAIVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHP----PQGQPQYVVPEHQEGSYSVL-- 925

  Fly    69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
                ..|:|::||.:|.:|.|.||.:|||.|||..||:.::|::|:.||||:.:|:||.|:.|||
  Rat   926 ----NRGVVSDWDALEVLWQHLFYCKLRVQPEEMAVLVADSPISPRTNREKVAEILFERFHVPAM 986

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
            ....||:|:|||.|||||:|:.||.|.|:..||..|...|....|||:||.||||||.::|...|
  Rat   987 QTVHQALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPLDTYRLDVAGADLTDYLAQLLMSGG 1051

  Fly   199 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 263
            :|   ..:..|||.|||..||||:|...||  |.:.|.::..:.|||..|||:|:|||.||||||
  Rat  1052 HS---PPKGGIVRQIKEACCYVAMDTTTEM--ARNQSQVQVDFVLPDKHVITLGSERFCCPEALF 1111

  Fly   264 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
            ||:.||:...|:.:....||.:.:|..::.|.||.||.||:|:..|..:||::|   |.|..   
  Rat  1112 QPNLLGLNQLGLPQLALLSISRLEVKQQEQLLANVVLEGGSTLINGFPERMRQE---LGPGA--- 1170

  Fly   329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
            .::..|.|..:.|:||||:|...:||.:|:|::||:|.||..:::
  Rat  1171 TVLGSPHRAVAAWLGGSIMACRDSFQSLWLSRREYEEEGPWAIYK 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 152/370 (41%)
Actl11NP_001019959.2 PHA03247 <200..485 CDD:223021
NBD_sugar-kinase_HSP70_actin 871..1215 CDD:418402 151/364 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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