DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and Actl7b

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001020588.1 Gene:Actl7b / 313183 RGDID:1305655 Length:417 Species:Rattus norvegicus


Alignment Length:373 Identity:169/373 - (45%)
Similarity:238/373 - (63%) Gaps:6/373 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-RPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            ::.|||:|.||..||.|:||:..|.....|.|| |........|...|::|||.|..:....|.|
  Rat    49 KIKALVIDLGSQYCKCGYAGEPRPTYFISSTVGKRSAEMAADAGDTFKETYVGHELLNMEASLKL 113

  Fly    69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
            ..|::||:|.:||.::.||.:.|:..:::.||||.||:::.||:|.:||||..::|||||..|||
  Rat   114 VNPLKHGVVVDWDCIQNIWEYIFHTAMKILPEEHAVLVSDPPLSPTSNREKYAELMFETFGIPAM 178

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
            :|..||:||:|:.|:|:|:|::||.||||.|||.||..||....|:|.||.|||:|||::|.|.|
  Rat   179 HVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAG 243

  Fly   199 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 263
            :.|:.. ...|:..||:|.||.||..|:||:...  ..|...||||||:|||||.|||||.|.||
  Rat   244 HKFSDD-HLHIIEHIKKKCCYAALLPEEEMSLGL--DELHVDYELPDGKVITIGQERFRCSEMLF 305

  Fly   264 QPSFLGMEACGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
            :||.:|....|:.|.|...:.:|. ...::::.||.:|.||.||..|..:|.|:|::.|.|....
  Rat   306 KPSLVGSTQPGLPELTATCLDRCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSP 370

  Fly   328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
             .:.|.||||.|||.||||||||..|||:|:||:|::|.|.:.::.||
  Rat   371 -TVAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGCAAIYSKC 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 169/373 (45%)
Actl7bNP_001020588.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
ACTIN 51..417 CDD:214592 167/369 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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