DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and arx-2

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_505657.1 Gene:arx-2 / 179440 WormBaseID:WBGene00000200 Length:395 Species:Caenorhabditis elegans


Alignment Length:375 Identity:186/375 - (49%)
Similarity:251/375 - (66%) Gaps:16/375 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
            :|||||:|..|.|:||.:.|..:|||:||||  |....:..:..||..||:|....|.:|.:.||
 Worm     9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYP 73

  Fly    72 IEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
            :::|||.|||||..:|.|||..| |.:.|:|..:||||.||||.:|||||.|:|||.:...::||
 Worm    74 MDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYV 138

  Fly   136 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
            |:||||:|||.|..||:|:||||||:|..|:|||:||.|...|||:||||:|.||:|:|.:|||:
 Worm   139 AVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYN 203

  Fly   201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 265
            |..:|:.|.||.:||||||:|.|.|||...|..::.|.:.|.||||:||.:|.|||..||.||||
 Worm   204 FNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQP 268

  Fly   266 SFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL--------- 321
            ..:.:|..|:.|..:..|...|:|.|.|.|.:.|||||||||||:..|::||:..|         
 Worm   269 HLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGN 333

  Fly   322 --APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 367
              |....||:|.|||.||:.|::||::||:|  ...|..|:||:||:|.|
 Worm   334 TDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 186/375 (50%)
arx-2NP_505657.1 NBD_sugar-kinase_HSP70_actin 1..383 CDD:302596 185/373 (50%)
ACTIN 6..392 CDD:214592 186/375 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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