DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and act-5

DIOPT Version :10

Sequence 1:NP_511052.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_499809.1 Gene:act-5 / 176793 WormBaseID:WBGene00000067 Length:375 Species:Caenorhabditis elegans


Alignment Length:374 Identity:350/374 - (93%)
Similarity:363/374 - (97%) Gaps:0/374 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
            :||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Worm     2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66

  Fly    68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 132
            |||||||||||||||||||||||||||||:|||||||||||||||||:|||||||||||||||||
 Worm    67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPA 131

  Fly   133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
            |||.|||||||||||||||||||:||||:|||||||||||||||.||||||||||||:|||||||
 Worm   132 MYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTER 196

  Fly   198 GYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAL 262
            ||:|||||||||||||||||||||.|||.|:|.||||||||||||||||||||||||||||||.|
 Worm   197 GYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVL 261

  Fly   263 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 327
            |||:|:|||..|||||||.|||||||||||||||||||||||:|:|||||||||||..|||||||
 Worm   262 FQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMK 326

  Fly   328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            |||||||||||||||||||||||||||||||||||||||||||||||||
 Worm   327 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_511052.1 ASKHA_NBD_actin 7..371 CDD:466823 341/363 (94%)
act-5NP_499809.1 ASKHA_NBD_actin 6..370 CDD:466823 341/363 (94%)

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