DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and ACTRT1

DIOPT Version :10

Sequence 1:NP_511052.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_612146.1 Gene:ACTRT1 / 139741 HGNCID:24027 Length:376 Species:Homo sapiens


Alignment Length:372 Identity:180/372 - (48%)
Similarity:255/372 - (68%) Gaps:3/372 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK 69
            :|.|::.|||||:||||.:|:..||.|..|::|..:....:..:.|| .:||.||..|...|.|.
Human     8 DVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQK-YFVGQEALYKYEALHLH 71

  Fly    70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
            ||||.|:||.||||||:|.|.|..||.|.|.:.|||:||..|||:..|||:.::|||||:.|..|
Human    72 YPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFY 136

  Fly   135 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199
            ::..||.:||||...||:|:||||||:.||||:|||:||||:.:|.:||||:|::|.::|...|:
Human   137 LSNHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGF 201

  Fly   200 SFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQ 264
            :|.....:.:|.:|||||||:||:.|:|:  ..|...:..:|.||||.||..|:|.::.||.||.
Human   202 NFPCILNKAVVNNIKEKLCYIALEPEKEL--RKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFA 264

  Fly   265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
            |..||:.:.|:.:...:||||||.||:..|||:.|||||||:.||:.:|:.||:..||.....||
Human   265 PDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIK 329

  Fly   330 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            |.|.|:|.:|.|||.||:.|:|:|:|||::..::.|.|.|:|.|:||
Human   330 ITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_511052.1 ASKHA_NBD_actin 7..371 CDD:466823 175/363 (48%)
ACTRT1NP_612146.1 ASKHA_NBD_actin_Arp-T1-3 10..367 CDD:466848 173/359 (48%)

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