DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and Actl10

DIOPT Version :9

Sequence 1:NP_001014725.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_003749645.1 Gene:Actl10 / 100911682 RGDID:6491130 Length:334 Species:Rattus norvegicus


Alignment Length:317 Identity:111/317 - (35%)
Similarity:180/317 - (56%) Gaps:18/317 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
            :||:||:|.:||.:|.:|.......|::.||:.|||::::|..|...|||:.:::||....||.:
  Rat    25 HPIKHGVVVDWDALEGLWERLMVGGLQIHPEQWPVLVSDSPSAPPEGREKVAELLFEALTVPACH 89

  Fly   135 VAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199
            :|..|:|:|.:.|..:|:.:::|.||.|..|||.|::...|..||::||..|:.|...:|.....
  Rat    90 MASTALLALCSVGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLSRYFRDLLVASCP 154

  Fly   200 SFTTTA-EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 263
            .....| .|:.|..:|::.|||:|||:.::...|...  ...:.|..|..:.:|:|||||||.:|
  Rat   155 DLQLHALPRKTVTQLKKRCCYVSLDFQGDICDPARHQ--RACFCLGKGCYVRLGSERFRCPEPIF 217

  Fly   264 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI---------T 319
            |||.||....|:....:.::.|....:|..|....||:||:|::||..:||..|:         .
  Rat   218 QPSLLGHPEPGLPTLAFQALQKIPTTLRTRLANTVVLAGGSTLFPGFVERMNLELQAQCRRHGYP 282

  Fly   320 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||.|.     ::|.|.|..:||.|||::|||.:||:.|:::..|.|.||.:| |:.|
  Rat   283 ALQPC-----LVAHPGRGTAVWTGGSMMASLHSFQRRWMTRAMYQEYGPFLV-REVF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_001014725.1 PTZ00281 1..376 CDD:173506 110/315 (35%)
Actl10XP_003749645.1 NBD_sugar-kinase_HSP70_actin 25..329 CDD:302596 108/310 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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