DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act5C and actr1a

DIOPT Version :10

Sequence 1:NP_511052.1 Gene:Act5C / 31521 FlyBaseID:FBgn0000042 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001163973.1 Gene:actr1a / 100101796 XenbaseID:XB-GENE-491902 Length:376 Species:Xenopus tropicalis


Alignment Length:370 Identity:199/370 - (53%)
Similarity:278/370 - (75%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:..||:|:::||:|
 Frog    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHIRVMAGALEGDLFIGPKAEEHRGLLSIRYPME 76

  Fly    74 HGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            ||||.:|:|||:||.:.: .::|:...||||||||||||||:.|||:..::.|||||.||:::::
 Frog    77 HGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISM 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:||||||||:|.||||||:|:||:|:|:|:||||::.:|...|.:.||.|.
 Frog   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFH 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDGQVITIGNERFRCPEALFQPS 266
            |:||.|||:.|||:.||::::.:::     .:...||: |.||||..|.||..|||.||.||:|.
 Frog   207 TSAEFEIVKTIKERACYLSINPQKD-----ETLETEKAQYYLPDGSTIEIGPARFRAPELLFRPD 266

  Fly   267 FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 331
            .:|.|..||||....:|.|.|:|:|:.|::|.|||||:|::.|..||:..|:..|||..:||:|.
 Frog   267 LIGEECEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRIS 331

  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
 Frog   332 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act5CNP_511052.1 ASKHA_NBD_actin 7..371 CDD:466823 195/363 (54%)
actr1aNP_001163973.1 ASKHA_NBD_Arp1 9..375 CDD:466820 197/367 (54%)

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