DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16721 and Tcp11l1

DIOPT Version :10

Sequence 1:NP_572275.1 Gene:CG16721 / 31520 FlyBaseID:FBgn0029820 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001102672.1 Gene:Tcp11l1 / 499846 RGDID:1562313 Length:509 Species:Rattus norvegicus


Alignment Length:503 Identity:161/503 - (32%)
Similarity:258/503 - (51%) Gaps:43/503 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DAQENRS--EQSGQSGDHE---EHEERRIRTDSESSVESMTRFVLPSLDGTPPKIVTLDEVSSMF 61
            :|.|::|  .:.||.|..|   |..:.::::||.|.:    |...|  ..:||::||::|:....
  Rat    12 EAGESKSAASEEGQKGALECSDEALQEKVKSDSPSPL----RVGRP--HSSPPRLVTVEELLETA 70

  Fly    62 KNLRNMELAHEIALNPDFKLQKYEPPSDSLEGAIKKMVHKAFWDLLRVQLDRQPPSYDQAIRLLA 126
            |.:.||.|||||.:|.||::...|....|||..:|::|||||||.|.|||...||:||.||:|:.
  Rat    71 KGVTNMALAHEIVVNGDFRINAVELAEGSLEKRVKEIVHKAFWDCLSVQLSEDPPTYDHAIKLVG 135

  Fly   127 EIKECFPQLLSPNNERALAHINEVLDDSVIRQQAERGTLDFRAYANFVINILSRSCSPARDEAVA 191
            ||||.....|.|.:.|....|.|.||..:|:|:||.|.||....|.|::.::...|:|||||.|.
  Rat   136 EIKETLLSFLLPGHTRLRNQITETLDLELIKQEAENGALDISKLAEFIVGMMGILCAPARDEEVK 200

  Fly   192 ALRKIDDVVDTFRCILELMTLMKLDMANFMLRLARTEIAANSVQYEKEKFSKYLREFHGNVGFPA 256
            .|:.:.::|..||.|..::.|||:|||||.:...|..:...||:||::||.:.|.:...::.|  
  Rat   201 KLKDVKEIVPLFRAIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEVLEKQPNSLDF-- 263

  Fly   257 TEDWLQ-----------RH-------RSGSSD-----DETIYN-AYMQLIDYP-ADKEFPELLRI 296
            ...||:           :|       .:||.|     ..::.| ||::|:.:. ..:.|||.:.:
  Rat   264 VTQWLEEASNDLLTQKCKHALPAGGGAAGSGDAPLLTAASVQNYAYLKLLKWDHFRRPFPETVLM 328

  Fly   297 DKERFAGLSWRAQRLILCAS--LISVAQGMPIISQRRENRIKLAQQLDIIVQDIKNQD-QVASTI 358
            |:.||..|..:.::|.|..:  |::.:...|.:|.......||...:.|::.|:.... |:...:
  Rat   329 DQPRFQELQLQLEQLALLGAVLLVTFSTSAPAVSGHAGFAEKLKTVVKILLADVHLPSFQLEDAL 393

  Fly   359 ESCYEQIRSFVNKALEQENLPALSDADQAALKNQVLKLANKTSPVPSLMAKRLDGYVRVTLRSNG 423
            .|..|::...|:..|........|.:.:..||.|:..||:...|:..:|..|:..::...|.|..
  Rat   394 TSIGEKVCLEVSSCLSMCGSSPFSVSKETVLKGQIQALASPDDPIRRIMESRILTFLETYLASGH 458

  Fly   424 S--IPPPPSGFADYQEELVAFIASFRRLVSYNHAVFGEHFHQILNKTL 469
            .  :|..|.|....|:||......|.|||:||..||..::.:||:|.|
  Rat   459 QKLLPTVPGGLGPIQKELEEVAVKFVRLVNYNKMVFCPYYDEILSKLL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16721NP_572275.1 Tcp11 69..466 CDD:461743 137/426 (32%)
Tcp11l1NP_001102672.1 Tcp11 78..502 CDD:461743 136/425 (32%)

Return to query results.
Submit another query.