DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp30 and USP44

DIOPT Version :9

Sequence 1:NP_001284912.1 Gene:Usp30 / 31519 FlyBaseID:FBgn0029819 Length:558 Species:Drosophila melanogaster
Sequence 2:XP_005269229.1 Gene:USP44 / 84101 HGNCID:20064 Length:743 Species:Homo sapiens


Alignment Length:590 Identity:115/590 - (19%)
Similarity:183/590 - (31%) Gaps:235/590 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IAGLHNFGLTCFLNTLLQAMAACPQFIAWLQLYNNASPDRKSLITSMLNTLEVVNGTHATLRGDP 102
            :.||.|.|.||::|::||.::....|             |:..:...||....:..:..| |...
Human   272 VTGLRNLGNTCYMNSVLQVLSHLLIF-------------RQCFLKLDLNQWLAMTASEKT-RSCK 322

  Fly   103 YSP--GAVLRALNALGWVIPQEEHDAHELFHVLLTCLEEEAIRPQPLGCLSDALPTDNDDNSSLA 165
            :.|  ..|:..:|                     .|.|::.                        
Human   323 HPPVTDTVVYQMN---------------------ECQEKDT------------------------ 342

  Fly   166 GTATPVGGF--RSFSSMAAGLGASQRIGD-----QPNRPSSAMLTDFLNMEYDESTSLQRLVRSE 223
                   ||  ...||:::||......|.     ||..|:|..::                :..|
Human   343 -------GFVCSRQSSLSSGLSGGASKGRKMELIQPKEPTSQYIS----------------LCHE 384

  Fly   224 AHTPDSPASVCERDGNDRLGSVLLDA----VSPGTPFGFPLVSNPDSLATPMLGGERSSRPRLPQ 284
            .||               |..|:...    |||     |.::.:...|.....|          .
Human   385 LHT---------------LFQVMWSGKWALVSP-----FAMLHSVWRLIPAFRG----------Y 419

  Fly   285 SQQQQDEGLNRRVSSSCRSLERLHRG--------PGRVSIWSNMMPSQVAHP----FQGAMGAQI 337
            :||...|.|       |..|:::.|.        |..:......:..||.:.    |.|.:.:|:
Human   420 AQQDAQEFL-------CELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQV 477

  Fly   338 VCNGCGSKSAVRYDKFDSITLNLPPQRR-TGLSLG-------HLLSEYITSEDLSD--VKCDSCN 392
            .|..|.:||.. .:.|..::|..|.:.: :|..:.       .:|:::..:|.|..  ..||.||
Human   478 TCLACDNKSNT-IEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQCN 541

  Fly   393 E-----------TTTHTKSVTFAKLPACLCIHVAR------------------------------ 416
            .           .|...|.:....||..|.:|:.|                              
Human   542 SKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFSTNSLCILINTLLAMLRSSNGKYDQQTEK 606

  Fly   417 -TVWLPTGQVCKRKDYVH--FPESLSMAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNGVGGG 478
             |.|  :|:..:.|..||  |.|.|:|.||                .......|..|        
Human   607 ITGW--SGRNNREKIGVHVGFEEILNMEPY----------------CCRETLKSLRP-------- 645

  Fly   479 EGFGTMFPKNLYRLLAVVVHSGEA-NSGHFVTYRRGSLRNAHRWYYTSDTIVREVSIDEVLSVPA 542
            |.|       :|.|.|||:|.|:. .|||:..|...|  ....|.:.:|:.:...::|||....|
Human   646 ECF-------IYDLSAVVMHHGKGFGSGHYTAYCYNS--EGGFWVHCNDSKLSMCTMDEVCKAQA 701

  Fly   543 YLLFY 547
            |:|||
Human   702 YILFY 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp30NP_001284912.1 Peptidase_C19 39..>139 CDD:271592 19/101 (19%)
UCH <304..547 CDD:278850 66/309 (21%)
Peptidase_C19F <323..548 CDD:239127 65/284 (23%)
USP44XP_005269229.1 zf-UBP 29..90 CDD:280334
UCH 272..706 CDD:278850 113/588 (19%)
Peptidase_C19 274..707 CDD:271592 115/588 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1867
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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