DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp30 and UBP15

DIOPT Version :9

Sequence 1:NP_001284912.1 Gene:Usp30 / 31519 FlyBaseID:FBgn0029819 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001185019.1 Gene:UBP15 / 838281 AraportID:AT1G17110 Length:928 Species:Arabidopsis thaliana


Alignment Length:522 Identity:97/522 - (18%)
Similarity:157/522 - (30%) Gaps:221/522 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GLHNFGLTCFLNTLLQAMAACPQFIAWLQLYNNASPDRKSLITSMLNTLEVVNGTHATLRGDPYS 104
            ||.|.|.:|:.|.:||::......:|:|                       :..:|:        
plant   443 GLVNCGNSCYANAVLQSLTCTKPLVAYL-----------------------LRRSHS-------- 476

  Fly   105 PGAVLRALNALGWVIPQEEHDAHELFHVLLTCLEEEAIRPQPLGCLSDALPTDNDDNSSLAGTAT 169
                 |:.:...|.:..|...     ||::                             |..:..
plant   477 -----RSCSGKDWCLMCELEQ-----HVMM-----------------------------LRESGG 502

  Fly   170 PVGGFRSFSSMAAGLGASQRIGDQPNRPSSAMLTDFLNMEYDESTSLQRLVRSEAHTPDSPASVC 234
            |:...|..|.|.:   .:.:|||.....:.    :||.:                          
plant   503 PLSASRILSHMRS---INCQIGDGSQEDAH----EFLRL-------------------------- 534

  Fly   235 ERDGNDRLGSVLLDAVSPGTPFGFPLVSNPDSLATPMLGGERSSRPRLPQSQQQQDEGLNRRVSS 299
                                     ||::..|:....||||....|||.::              
plant   535 -------------------------LVASMQSICLERLGGETKVDPRLQET-------------- 560

  Fly   300 SCRSLERLHRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGCGSKSAVRYDKFDSITLNLPPQR 364
                                   :.|.|.|.|.:.:::.|..|..:|. ||:....:||.:    
plant   561 -----------------------TLVQHMFGGRLRSKVKCLRCDHESE-RYENIMDLTLEI---- 597

  Fly   365 RTGL--SLGHLLSEYITSEDLSD---VKCDSCNETTTHTKSVTFAKLPACLCIHVARTVWLPTGQ 424
             .|.  ||...|:::...|||..   .:|..|.......|.::..:.|..|.|.:.|   ...|:
plant   598 -YGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKR---FQEGR 658

  Fly   425 VCKRKDYVHFPESLSMAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNGVGGGEGFGTMFPKNL 489
            ..|....:.|||.|.|.|:      :......|                              .|
plant   659 YGKINKCISFPEMLDMIPF------MTRTGDVP------------------------------PL 687

  Fly   490 YRLLAVVVHSGEAN---SGHFVTYRRGSLRNAHRWYYTSDTIVREVSIDEVLSVPAYLLFYDRGQ 551
            |.|.||:||....|   |||:::|.: .||.  .||...|:.:..|.:.:|:|..||:|||.|..
plant   688 YMLYAVIVHLDTLNASFSGHYISYVK-DLRG--NWYRIDDSEIHPVPMTQVMSEGAYMLFYMRSY 749

  Fly   552 QR 553
            .|
plant   750 PR 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp30NP_001284912.1 Peptidase_C19 39..>139 CDD:271592 16/98 (16%)
UCH <304..547 CDD:278850 57/250 (23%)
Peptidase_C19F <323..548 CDD:239127 58/232 (25%)
UBP15NP_001185019.1 zf-MYND 130..167 CDD:280009
Peptidase_C19E 441..746 CDD:239126 94/515 (18%)
UCH 441..745 CDD:278850 93/514 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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