Protein Alignment Usp30 and usp3

DIOPT Version :9

• Sequence 1: NP_001284912.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Sequence 2: NP_001186800.1
• Gene: usp3 / 569679
• ZFINID: ZDB-GENE-030131-5142
• Length: 524
• Species: Danio rerio
• Alignment Length: 575
• Identity: 118/575 - (20%)
• Similarity: 185/575 - (32%)
• Gaps: 237/575 - (41%)

  Fly    24 WGPSGSRLRQRRGQI----AGLHNFGLTCFLNTLLQAMAACPQFIAWLQ------LYNNASPDRK 78
            :.|.....:...|.:    .||.|.|.|||:|.:||:::....|..:.:      |.:..:..|:
Zfish   144 FSPDSKMKQDSEGALVQCATGLRNLGNTCFMNAILQSLSNIQVFSCYFKELPSVALRSGKTAGRR 208

  Fly    79 SLIT-----SMLNTLEVVNGTHATL-RGD--PYSPGAVLRALNALGW-VIPQ----EEHDAHELF 130
            ...|     |.::.:|....|..:| :|.  .:||.|:...:    | ::|.    ::.||||..
Zfish   209 MYHTRSQGDSSVSLVEEFRKTLCSLWQGSQTAFSPDALFYVI----WKIMPSFRGYQQQDAHEFL 269

  Fly   131 HVLLTCLEEEAIRPQPLGCLSDALPTDNDDNSSLAGTATPVGGFRSFSSMAAGLGASQRIGDQPN 195
            ..||..|..|               ...:.|.|.:...|                     .|:||
Zfish   270 RYLLDHLHRE---------------MQGNKNGSPSPPVT---------------------SDEPN 298

  Fly   196 RPSSAMLTDFLNMEYDESTSLQRLVRSEAHTPDSPASVCERDGNDRLGSVLLDAVSPGTPFGFPL 260
            ..|.:..  |:|                                             ||
Zfish   299 HASESKC--FIN---------------------------------------------GT------ 310

  Fly   261 VSNPDSLATPMLGGERSSRPRLPQSQQQQDEGLNRRVSSSCRSLERLHRGPGRVSIWSNMMPSQV 325
                .::.|.:.|
Zfish   311 ----STIVTSVFG---------------------------------------------------- 319

  Fly   326 AHPFQGAMGAQIVCNGCGSKSAVRYDKFDSITLNLPPQRR----------TGLSLGHLLSEYITS 380
                 |.:..::.|..||::|. ::|.|..::|::|.|.|          ...:|...|..:...
Zfish   320 -----GVLQNEVYCLICGTESR-KFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSFTDL 378

  Fly   381 EDLSDVK---CDSCNETTTHTKSVTFAKLPACLCIHVARTVWLPTGQVCKRKD-YVHFPE-SLSM 440
            |:|.:.:   |..|.:....||.....|||..||:|:.|..|  |..:..:.| ||.||. .|.|
Zfish   379 EELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHW--TAFLRNKVDTYVEFPMCGLDM 441

  Fly   441 APYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNGVGGGEGFGTMFPKNLYRLLAVVVHSGEA-NS 504
            ..| .::|                 .:|||               .:.||.|.|||||.|.. .|
Zfish   442 KSY-LLEP-----------------ENSLP---------------ERCLYDLAAVVVHHGSGIGS 473

  Fly   505 GHFVTYRRGSLRNAHRWYYTSDTIVREVSIDEVLSVPAYLLFY----DRGQQRQL 555
            ||:..|.    |:..:||:.:|:.|..||.:.||...||:|||    ||..|.:|
Zfish   474 GHYTAYG----RHEGQWYHFNDSTVTLVSEEAVLKAKAYILFYTEHSDRESQSKL 524

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp30	NP_001284912.1	Peptidase_C19	39..>139	CDD:271592	31/118 (26%)
		UCH	<304..547	CDD:278850	65/258 (25%)
		Peptidase_C19F	<323..548	CDD:239127	67/244 (27%)
usp3	NP_001186800.1	zf-UBP	29..109	CDD:280334
		UCH	162..512	CDD:278850	110/543 (20%)
		Peptidase_C19	164..513	CDD:271592	111/542 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910