DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp30 and Usp7

DIOPT Version :9

Sequence 1:NP_001284912.1 Gene:Usp30 / 31519 FlyBaseID:FBgn0029819 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster


Alignment Length:588 Identity:109/588 - (18%)
Similarity:167/588 - (28%) Gaps:273/588 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ESEK-------ILMAAGVTVAAVVGAFVFWGPSGSRLRQRRGQIAGLHNFGLTCFLNTLLQAMAA 59
            :|||       |.:...|...|..|  |.|..     ::..|.: ||.|.|.||::|:|||    
  Fly   205 DSEKSYVHNNSITLEVHVVADAPHG--VLWDS-----KKHTGYV-GLKNQGATCYMNSLLQ---- 257

  Fly    60 CPQFIAWLQLYNNASPDRKSLITSMLNTLEVVNGTHATLRGDPYSPGAVLRALNALGWVIPQEEH 124
                                       ||...|    :||...|                     
  Fly   258 ---------------------------TLYFTN----SLRLSVY--------------------- 270

  Fly   125 DAHELFHVLLTCLEEEAIRPQPLGCLSDALPTDNDDNSSLAGTATPVGGFRSFSSMAAGLGASQR 189
                                        .:||:.||:|...|.:..    |.|..:        :
  Fly   271 ----------------------------RIPTEADDSSKSVGLSLQ----RVFHEL--------Q 295

  Fly   190 IGDQPNRPSSAMLTDFLN-------MEYDESTSLQRLVRSEAHTPDSPASVCERDGNDRLGSVLL 247
            .||:|  ..:..||....       |::|....|:.|:                   |:|.|.:.
  Fly   296 FGDRP--VGTKKLTKSFGWETLDSFMQHDVQEFLRVLL-------------------DKLESKMK 339

  Fly   248 DAVSPGTPFGFPLVSNPDSLATPMLGGERSSRPRLPQSQQQQDEGLNRRVSSSCRSLERLHRGPG 312
            ..:..||                           :|        ||                   
  Fly   340 GTILEGT---------------------------IP--------GL------------------- 350

  Fly   313 RVSIWSNMMPSQVAHPFQGAMGAQIVCNGCGSKSAVRYDKFDSITLNLPPQRRTGLSLGHLLSEY 377
                            |:|.|.:.|.|......| .||:.|..|.||:..::    ::.....:|
  Fly   351 ----------------FEGKMSSYIKCKNVDYNS-TRYETFYDIQLNIKDKK----NIYESFQDY 394

  Fly   378 ITSEDL-SDVKCDS-CNETTTHTKSVTFAKLPACLCIHVARTVWLP-TGQVCKRKDYVHFPESLS 439
            :..|.| .|.|.|: .:.....:|.|.|...|..|.:|:.|..:.| |....|..|...|.|.::
  Fly   395 VAPETLEGDNKYDAGVHGLQEASKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFEFYEHIN 459

  Fly   440 MAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNGVGGGEGFGTMFPKNLYRLLAVVVHSGEANS 504
            :..|.                                 .|...|:..   |.|.||:||||:.:.
  Fly   460 LDRYL---------------------------------AESENTLAD---YVLHAVLVHSGDNHG 488

  Fly   505 GHFVTYRRGSLRNAHRWYYTSDTIVREV-----------SIDEVLSV-----PAYLLFYDRGQQR 553
            ||:|.:.......  ||:...|.:|...           .:|:.:|.     .||:|.|.|  |.
  Fly   489 GHYVVFINPKADG--RWFKFDDDVVSSCRKQEAIEQNYGGMDDEISFHAKCSNAYMLVYIR--QS 549

  Fly   554 QLN 556
            :|:
  Fly   550 ELD 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp30NP_001284912.1 Peptidase_C19 39..>139 CDD:271592 16/99 (16%)
UCH <304..547 CDD:278850 54/261 (21%)
Peptidase_C19F <323..548 CDD:239127 54/243 (22%)
Usp7NP_572779.2 MATH_HAUSP 100..229 CDD:239741 6/23 (26%)
COG5077 101..1119 CDD:227409 109/588 (19%)
peptidase_C19C 239..549 CDD:239124 98/542 (18%)
USP7_ICP0_bdg 647..886 CDD:289221
USP7_C2 897..1113 CDD:291217
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456929
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24006
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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