Protein Alignment Usp30 and usp-3

DIOPT Version :9

• Sequence 1: NP_001284912.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Sequence 2: NP_493434.3
• Gene: usp-3 / 190579
• WormBaseID: WBGene00013506
• Length: 550
• Species: Caenorhabditis elegans
• Alignment Length: 553
• Identity: 113/553 - (20%)
• Similarity: 189/553 - (34%)
• Gaps: 134/553 - (24%)

  Fly    41 LHNFGLTCFLNTLLQAMAACPQFIAWLQLYNNASPDRKSL-----ITSMLNTLEVVNGTHATLRG 100
            ||:|.     .|....:..|..|    :||..:..|..||     :..:|.:|:::......:.|
 Worm    82 LHHFE-----ETSHPVVIDCISF----ELYCYSCDDEVSLDFEPSLYGVLKSLKLLFDREDVMEG 137

  Fly   101 --DPYSPGAVLRALNALGWVIPQEEHDAHELFHVLLTCLEEEAIRPQPLGCLSDALPTDNDDNSS 163
              .|..|....:.:.::.....|:.|.|....:......::..:.|.    ..|..|......::
 Worm   138 GDGPTIPAQPFQTVTSVASTFTQKLHVAPASRNSKKKRGKKGKVSPM----FVDTPPFQQQQGAA 198

  Fly   164 LAGTATPVGGFRSFSSMAAGLGASQRIGDQPNRPSSAMLTDFLN------------MEYDES-TS 215
            :....| :....|.||.:.|..:|..|..:|....:...|.|:|            .||..| :|
 Worm   199 VIHDVT-LSSTNSTSSGSGGATSSSEIAYRPRGMRNVGNTCFMNAVLQALASISEFREYIMSLSS 262

  Fly   216 LQRLVRSEAHTPDSPASVCERDGNDRLGSVLLDAVSPGTPFGFPLVSNPDSLA----TPMLGGER 276
            |:..:..|.. |.:..:.|..  .|....:|:.  .....|..|...|....|    .|...|.|
 Worm   263 LEDYIHDEKE-PKNGGNYCYL--TDEYRKLLIS--QSARSFREPTAPNEFREAFISVCPRFRGFR 322

  Fly   277 SSRPRLPQSQQQQDEGLNRRVSSSCRSLERLHRGPGRVSIWSNMMPSQVAHP----FQGAMGAQI 337
                     |....|.:...:.|....:.:..:.||        ||.....|    |:|.:.:.:
 Worm   323 ---------QHDSHEFMRYFMDSLHTEMRKCRKLPG--------MPDDKHTPISKYFEGTLQSSV 370

  Fly   338 VCNGCGSKSAVRYDKFDSITLNLPPQRRTG-LSLGHLLSEYITSEDL---SDVKCDSCNETTTHT 398
            :|..|.:.|. :.|:|..::|::|.||... :.|...||.:...|.|   ...:|..|....|.:
 Worm   371 ICQTCRNCSN-KIDEFMDLSLDIPAQRNASKVRLSDCLSTFFKLEMLEKGEKPECAKCKTKQTCS 434

  Fly   399 KSVTFAKLPACLCIHVAR----------TVWLPTGQVCKRKDYVHF-PESLSMAPYSFVQPHLNS 452
            |.:...|||..||:|:.|          .:..|.||:    |...| .:....||.:
 Worm   435 KQMFIRKLPQVLCLHMKRFRDNGGKNDAIIDFPMGQL----DVTQFLTDDSDEAPCT-------- 487

  Fly   453 QAGTPWGSTMSLYSSSLPMNNGVGGGEGFGTMFPKNLYRLLAVVVHSG-EANSGHFVTYRRGSLR 516
                                                 |.|.:::||.| ...|||::.:.:   |
 Worm   488 -------------------------------------YSLQSIIVHIGYGCGSGHYIAFGK---R 512

  Fly   517 NAHRWYYTSDTIVREVSIDEVLSVPAYLLFYDR 549
            |. ||:...||:|:.|....|....||:|.|.:
 Worm   513 NG-RWFQFDDTVVKGVDEAHVSKQKAYVLLYTK 544

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp30	NP_001284912.1	Peptidase_C19	39..>139	CDD:271592	19/104 (18%)
		UCH	<304..547	CDD:278850	59/262 (23%)
		Peptidase_C19F	<323..548	CDD:239127	55/244 (23%)
usp-3	NP_493434.3	zf-UBP	53..111	CDD:366940	9/37 (24%)
		UCH	229..542	CDD:366104	82/388 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1867
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810