Protein Alignment Usp30 and usp-33

DIOPT Version :10

• Sequence 1: NP_572274.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Sequence 2: NP_510570.2
• Gene: usp-33 / 181647
• WormBaseID: WBGene00010702
• Length: 716
• Species: Caenorhabditis elegans
• Alignment Length: 510
• Identity: 108/510 - (21%)
• Similarity: 163/510 - (31%)
• Gaps: 143/510 - (28%)

  Fly   124 HDAHELFHVLLTCLEEEAIRPQPLGCL--SDAL----------PTDNDDNSSLAGTA----TPVG 172
            ||:     |..:|..::.|......|.  ||.|          |....|..|:..|.    |||.
 Worm    93 HDS-----VSFSCAHQDCINSLKSSCCKNSDHLLPHMAVHNHPPILYHDRKSILCTRCMVYTPVK 152

  Fly   173 GFRSFSSMAAGLGASQRIGDQPNRPSSAM----LTDFLNMEYDESTSLQRLVRSEAH-------- 225
            .|.:.:..:    .|.:: :|..|....:    |..:||  :..:..:..:::...|
 Worm   153 RFLTHTKFS----TSDKV-EQETRKMEPLAFRGLLGYLN--FGNTCYMNAVLQLLGHCSPFTQYL 210

  Fly   226 ---TPDSPASVCERDGNDRLGSVLLDAVSPGTPFGFPLVSNPDSLATPMLGGERSSRPRLPQSQQ 287
               .|....|.|..|.......:.||..:..:.|..|.:| |..:.|.:    |:..|.....||
 Worm   211 IELIPPGGWSNCSHDIPKTAIQMALDLRNMYSDFPLPYLS-PWKIITCV----RNEMPGFECFQQ 270

  Fly   288 QQDEGLNRR----VSSSCRSLERLHRGPGRVSIWSNMMPSQVA----HP-------FQGAMGAQI 337
            |......|.    :....::....||....:.:.:..|...:|    |.       |||.:..||
 Worm   271 QDASEFMRNLLDILDRDLKTCSEYHRTNTLIEMGNPEMDYAIAMNAPHTKTAISAIFQGVLENQI 335

  Fly   338 VCNGCGSKS------------AVRYDKFD----SITLNLPPQRRTG------------------- 367
            .|:.||.:|            .|..::|:    |..|:.|....|.
 Worm   336 QCHSCGFRSRTIENFLDLSIPIVGENEFEEMYASKKLDTPKAPCTSSNIEDGQDPGFLVHQGAFN 400

  Fly   368 -LSLGHLLSEYITSEDLSD---VKCDSCNETTTHTKSVTFAKLPACLCIHVARTVWLPTGQVCKR 428
             .||...|..:..:..|.|   ..|..|......|||....:||..:.|.:.|......|. ||.
 Worm   401 KTSLESCLDRFFQNSTLQDDNQYSCSKCEVLVDATKSTKAHRLPEVIIIQLKRFRHTMFGS-CKV 464

  Fly   429 KDYVHFPESLSMAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMNNGVGGGEGFGTMFPKNLYRLL 493
            ...|.||              |.||....|.::                ||       ..||.|:
 Worm   465 GKVVEFP--------------LRSQDFGRWTTS----------------GE-------PALYDLV 492

  Fly   494 AVVVHSGEA-NSGHFVTYRRGSLRNAHRWYYTSDTIVREVSIDEVLSVPAYLLFY 547
            ..|||.|.: ..||:|:|.|....|  :||...|.:|......:|.....|:|.|
 Worm   493 GFVVHEGRSLEFGHYVSYCRHEQDN--QWYKFDDMVVTRCDATQVAKSQPYILMY 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp30	NP_572274.1	Peptidase_C19	39..>139	CDD:470612	4/14 (29%)
		Peptidase_C19F	<323..548	CDD:239127	64/276 (23%)
usp-33	NP_510570.2	UCH	183..545	CDD:425685	86/408 (21%)