Protein Alignment Usp30 and C34F6.9

DIOPT Version :10

• Sequence 1: NP_572274.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Sequence 2: NP_001366881.1
• Gene: C34F6.9 / 181312
• WormBaseID: WBGene00007943
• Length: 1181
• Species: Caenorhabditis elegans
• Alignment Length: 350
• Identity: 68/350 - (19%)
• Similarity: 113/350 - (32%)
• Gaps: 85/350 - (24%)

  Fly   140 EAIRPQPLGCLS-DALPTDNDDNSSLAGTATPVGGFRSFSSMAAGLGASQRIGDQPNRPSSAMLT 203
            |.:.||.|..|. .:||.||...|....::.    .::.::..|.......:.|:..:..|..|.
 Worm   724 ETVSPQELHSLKRKSLPDDNTTPSKQRRSSR----LKNSTAKTADFVYEPAVTDRSEQDKSPSLP 784

  Fly   204 DFLNMEYDESTSLQRLVRSEAHTPDSPAS-----------------VCERDGNDRLGSVLLDAVS 251
            ...|:..|...|.....||.:....:|.|                 ...|..|:.:.|:|...::
 Worm   785 REKNIGKDSGKSRLASQRSSSRRSSAPFSEESPSTKKTRFSTRVEQYSRRVSNETIKSLLQQVLT 849

  Fly   252 PGTP--------FGFPLVS----NPDSL--ATPMLGGERSSRPRLPQ------SQQQQDEGLNRR 296
            |...        |..|:|.    |.::|  |..|:    ....|:||      |...:.:..||.
 Worm   850 PKAADECDIQDHFPSPIVRRAIVNRNTLCYAISMV----QLLMRVPQVYSIVRSHSHKKQKANRS 910

  Fly   297 VSSSC------RSLERLHRGPGRVSI----WSNMMPSQV--------------------AHP--- 328
            ....|      ....|....|..|::    |.|:....:                    |||
 Worm   911 ECFLCMLTNLISERPRADDTPAFVALLKSNWKNIEDEGMQCVMEAMQYFFNKFDEEYMHAHPPIR 975

  Fly   329 --FQGAMGAQIVCNGCGSKSAVRYDKFDSITLNLPPQRRTGLSLGHLLSEYITSEDLSDVKCDSC 391
              |:..|.....|..|...|... ||...::::|  ..:|..::..::.:......:..:.|.||
 Worm   976 SYFEIEMFIAYECKSCKHVSNAP-DKAIYVSIDL--SSKTKGTMQSMVDKMANPIPVVGMNCKSC 1037

  Fly   392 NETTTHTKSVTFAKLPACLCIHVAR 416
            .:.|. ..:..|.|||..|...|.|
 Worm  1038 GQETL-CSTTRFTKLPEVLLYFVPR 1061

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp30	NP_572274.1	Peptidase_C19	39..>139	CDD:470612
		Peptidase_C19F	<323..548	CDD:239127	22/118 (19%)
C34F6.9	NP_001366881.1	Peptidase_C19	949..1130	CDD:239072	22/116 (19%)