DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp30 and Y67D2.2

DIOPT Version :10

Sequence 1:NP_572274.1 Gene:Usp30 / 31519 FlyBaseID:FBgn0029819 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_497422.3 Gene:Y67D2.2 / 175310 WormBaseID:WBGene00022052 Length:474 Species:Caenorhabditis elegans


Alignment Length:57 Identity:16/57 - (28%)
Similarity:23/57 - (40%) Gaps:12/57 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 DVGMGDTCVFAAFSFDFGGFGPSWIFG-----DPFIRQYCNIYDIGQQRIGFAKSLQ 391
            ||..|..||..|     |||..||:..     |.|:  :..:.|...::....|.|:
 Worm     3 DVHKGKVCVTGA-----GGFLGSWVVDLLLSKDYFV--HGTVRDPDNEKYAHLKKLE 52

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp30NP_572274.1 Peptidase_C19 39..>139 CDD:470612
Peptidase_C19F <323..548 CDD:239127 16/57 (28%)
Y67D2.2NP_497422.3 Peptidase_C19F 46..463 CDD:239127 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.

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