DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAA1 and gpaa1

DIOPT Version :9

Sequence 1:NP_572273.2 Gene:GAA1 / 31517 FlyBaseID:FBgn0029818 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_005171175.1 Gene:gpaa1 / 555496 ZFINID:ZDB-GENE-131121-587 Length:615 Species:Danio rerio


Alignment Length:664 Identity:210/664 - (31%)
Similarity:325/664 - (48%) Gaps:74/664 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSDPSISTQSKLVDGLARHVRKVCYALYVAGVAWFFCLALPEFNHGTYLSENALSPGLVYPE 65
            |||||||  :.:..|.:.|.|....:|...|:|.:.||..||...|...||:||||:...:|  |
Zfish     1 MGLLSDP--NRRKALTNLLTRLNTPICVVCYLAAIVWFMGLAFEPFTLRTYMSENAMGSTMV--E 61

  Fly    66 IRIDANRLAIQLLEELQRERKDHLSTTPHAWIAAKMNEFGLETHTHNYTLRYPF-GGGKEYH--- 126
            .|..|...|:...:|....:: .....|..|:...|...|||..|.::..:.|| ...||.:   
Zfish    62 ERFSAGERALAAAKEFNAHKR-KADGMPVEWLVKAMQARGLEVFTQSFFQKLPFPDENKERYMVR 125

  Fly   127 GKNIYGILRAPRIASTEGIVFAAPYRAASSVHTDISASVPLLLAFADFARRKNYWAKDLIFLITE 191
            |.|:||||||||...||.:|.:||.....:    .:.:|.:||..|.:.|.:.|||||:|||:.|
Zfish   126 GTNVYGILRAPRAPRTEALVISAPCTPGGT----NNQAVGILLGLAQYFRNQVYWAKDIIFLVNE 186

  Fly   192 QEQLGMQAWLEAYHDGDRELDLSKAYLRPGNLPARAGSLQAALNIEVQDLEIDHVDVRIEGLNGK 256
            .:.:|||||||.||    ..:::.....|  |..||||:||||::|:....|..:|:.:|||||:
Zfish   187 HDLIGMQAWLEGYH----HTNITGMEYSP--LQGRAGSIQAALSLELSSDVITSLDLVLEGLNGQ 245

  Fly   257 LPNLDMFNLVQRIMAREGIASGYKQAPRKKRRHSQSHFEQNFRQMLTMLASQSSGVPTGNHGLFH 321
            |||||:.||......:..:....:...::....|...:....:.|:.|:..|:||...|:||||.
Zfish   246 LPNLDLANLFYAFCQKLNVLCTIQGKLQRNDWDSAEGYTHAAQTMMLMVLKQASGRSWGDHGLFL 310

  Fly   322 RYRIDALTIAANRRATHATLKGSPGSAAVPLLKAIEGIARSLNNLLERFHQSFFFYVIVSNDRYI 386
            ||.|:|.:|.......|..:.      |..:.:.:||:.|.|||||||.|||:|||::.|..|::
Zfish   311 RYHIEAASIRGINSFRHYKMD------ATTIGRLLEGMVRKLNNLLERLHQSYFFYLLPSLSRFV 369

  Fly   387 SIGDYMPALVALVACAFLKAYLTWSTLPATNAELEKAAGWLREHEQEAELEENLEPDKFELPYGS 451
            |||.||||...|.....|:|...|..|         .|..|.|.:..:|.|:...|...     |
Zfish   370 SIGYYMPAFGLLAVILLLRALDLWVHL---------GAPVLSEVDGVSEAEQPSSPGVL-----S 420

  Fly   452 VLIYLTATLLIGFLCNVLPLQQYFLEIPMGAAPLTTS---VLSFLSL--IGFVLPFVV--VLPPG 509
            ||..:..:.|.|....:||:  |..::.:...|::.:   ||:.|::  .|..||...  :|...
Zfish   421 VLTPVVISHLTGVALYILPV--YLQDMAVEHFPVSETEAVVLTALAIYTAGLALPHNTQRLLSGE 483

  Fly   510 GLE----------LLHVAFLLIYGCALIVIGLLNFALGLFAAVLTVPLVIALETKEENSRSTLRN 564
            |.|          ||::|.||  ||.    .|:||:||...||..||:..::      :...|::
Zfish   484 GTEQGWKVLKLTSLLYLAVLL--GCT----ALINFSLGFILAVTLVPVTASI------TPHMLKS 536

  Fly   565 TIRLATLVMNPMMVVYVIVLAMTFYQFPELPVQKIMLRAATAAMDASAYGLIDSVIYGNWLYFVI 629
            ...||.::::|...::..||  .:.:..|.||.  :....|..:...:.|::|..:||:.:|.::
Zfish   537 VSALAMVLLSPAFTIFYCVL--IYQELMEAPVS--LPEGLTIFLSVISQGILDHALYGSLVYPLL 597

  Fly   630 CTIFLPLWIICWTL 643
            .....|.|::.|.:
Zfish   598 ALFVYPCWLMFWNI 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAA1NP_572273.2 Gaa1 127..639 CDD:282032 168/528 (32%)
gpaa1XP_005171175.1 Gaa1 126..607 CDD:282032 168/528 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579741
Domainoid 1 1.000 229 1.000 Domainoid score I2412
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37852
Inparanoid 1 1.050 279 1.000 Inparanoid score I2892
OMA 1 1.010 - - QHG46078
OrthoDB 1 1.010 - - D1486030at2759
OrthoFinder 1 1.000 - - FOG0005054
OrthoInspector 1 1.000 - - oto39041
orthoMCL 1 0.900 - - OOG6_104164
Panther 1 1.100 - - LDO PTHR13304
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R467
SonicParanoid 1 1.000 - - X3579
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.900

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