DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAA1 and gpaa1

DIOPT Version :9

Sequence 1:NP_572273.2 Gene:GAA1 / 31517 FlyBaseID:FBgn0029818 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001015809.1 Gene:gpaa1 / 548526 XenbaseID:XB-GENE-974957 Length:615 Species:Xenopus tropicalis


Alignment Length:675 Identity:204/675 - (30%)
Similarity:318/675 - (47%) Gaps:96/675 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSDPSISTQSKLVDGLARHVRK----VCYALYVAGVAWFFCLALPEFNHGTYLSENALSPGL 61
            |||||||:..      ..|:|.|.:    :|...|:.|..||..||...|...:|:|||::...:
 Frog     1 MGLLSDPNRR------QALSRVVTQLNTPLCIISYLVGTMWFLGLAFQPFTLRSYISENSMGSTM 59

  Fly    62 VYPEIRIDANRLAIQLLEELQRERKDHLSTTPHAWIAAKMNEFGLETHTHNY--TLRYPFGGGKE 124
            |  |.:..:....:....|....:|. ...:|.||:...|...|||.::.::  ||.:|....:.
 Frog    60 V--EEQFVSGERGLSYAREFAAHKKS-AGGSPVAWLERTMRGLGLEVYSQSFVRTLPFPDETTER 121

  Fly   125 Y--HGKNIYGILRAPRIASTEGIVFAAPYRAASSVHTDISASVPLLLAFADFARRKNYWAKDLIF 187
            :  .|.|:||||||||.||||.:|.:.|    .|...:.:.:|.||||.|.:.|.:.|||||:||
 Frog   122 FMVKGTNVYGILRAPRAASTESLVLSVP----CSEGQNNNQAVGLLLALASYFRGQIYWAKDIIF 182

  Fly   188 LITEQEQLGMQAWLEAYHDGDRELDLSKAYLRPGNLPARAGSLQAALNIEVQDLEIDHVDVRIEG 252
            |:.|.:.:||:||||.||      |::...::...:..|||::|||:::|:....|...|:.:||
 Frog   183 LVNEHDLIGMEAWLEGYH------DVNVTEIKSSVMLGRAGAIQAAVSLEMSSDVITSFDLVVEG 241

  Fly   253 LNGKLPNLDMFNLVQRIMAREGIASGYKQAPRKKRRHSQSHFEQNFRQMLTMLASQSSGVPTGNH 317
            |||:|||||:.||......:..:....:...::....:...:..:.:.||.|:..|.||.|.|:|
 Frog   242 LNGQLPNLDLVNLFYAFCQKNTLLCTIQGKLQRTDFDTFPGYLHSLQTMLIMMLKQGSGRPQGDH 306

  Fly   318 GLFHRYRIDALTI-AANRRATHATLKGSPGSAAVPLLKAIEGIARSLNNLLERFHQSFFFYVIVS 381
            |||.||.|:|:|: ..|....:.....:.|       |.:||:.|.||||.||.|||:|||::..
 Frog   307 GLFLRYHIEAITLRGINSFRQYKYDMNTVG-------KTLEGMFRKLNNLSERLHQSYFFYLLPC 364

  Fly   382 NDRYISIGDYMPALVALVACAFLKAYLTWSTLPATNAELEKAAGWLREHEQEAELEENLEPDKFE 446
            ..|::|||.||||:...:....|::...|..|..::...|...         .:.|::..|....
 Frog   365 LSRFVSIGIYMPAIGFFILILILRSLDLWIKLRRSDGTAEDGV---------MDTEQDPRPGILS 420

  Fly   447 LPYGSVLIYLTATLLIGFLCNVLPLQQYFL-----EIPMGAAPLTTSVLSFLSLI-----GFVLP 501
            |          ||.::  :|:...|..|:|     |:.....|::.|....|:.|     |..||
 Frog   421 L----------ATPIV--ICHATGLSLYYLPVMSQEMATDHFPVSESEAVVLTAIAIYVAGLALP 473

  Fly   502 FVV--VLPPGG----------LELLHVAFLLIYGCALIVIGLLNFALGLFAAVLTVPL-VIALET 553
            ...  ||...|          :.||::|.||  ||    |.|:||:||...||..||: .|...|
 Frog   474 HNTHRVLSGAGSDQGWMTLKLISLLYLAVLL--GC----ISLINFSLGFLLAVTIVPVAAIVQPT 532

  Fly   554 KEENSRSTLRNTIRLATLVMNPMMVVYVIVLAMTFYQFPELPVQKIMLRAATAAMDASAYGLIDS 618
            ......:.|...|..||.::..:.:         :.:..|.||.  :|......:.|.|.|::|.
 Frog   533 GPRALYALLLVLITPATTLLGSIFL---------YRELIEYPVS--LLECWQLFLQAIAGGMLDH 586

  Fly   619 VIYGNWLYFVICTIFLPLWIICWTL 643
            .:||:.|:..|.....|.|:..|.:
 Frog   587 YLYGSLLFPFIAFFVYPCWLQLWNV 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAA1NP_572273.2 Gaa1 127..639 CDD:282032 167/535 (31%)
gpaa1NP_001015809.1 Gaa1 126..609 CDD:367824 167/537 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 215 1.000 Domainoid score I2677
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37852
Inparanoid 1 1.050 245 1.000 Inparanoid score I3215
OMA 1 1.010 - - QHG46078
OrthoDB 1 1.010 - - D1486030at2759
OrthoFinder 1 1.000 - - FOG0005054
OrthoInspector 1 1.000 - - oto104423
Panther 1 1.100 - - LDO PTHR13304
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R467
SonicParanoid 1 1.000 - - X3579
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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