DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PUP3

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_011020.3 Gene:PUP3 / 856830 SGDID:S000000896 Length:205 Species:Saccharomyces cerevisiae


Alignment Length:209 Identity:44/209 - (21%)
Similarity:81/209 - (38%) Gaps:26/209 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
            |.:|..|. :|.:..||.|.:..|.|.....:.......||.| ..|::....|.|.|...:...
Yeast     4 PSSINGGI-VVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66

  Fly   107 TSAELDLHRLNTERRV------PVVCASMMLRRTLFRYQGHIGAAL-------VMGGVDTTGPQL 158
            ...:.:|::|..||.:      .:|.:|:..||....:.|.:.|.:       .:.|.|..|   
Yeast    67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIG--- 128

  Fly   159 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDL 223
             ||     ::...:...|:.:.....:.|..::|:|:.|...:.:.:|:......|..||....:
Yeast   129 -CI-----DEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVV 187

  Fly   224 CVITAKGAV--YLR 235
            .:|.....|  ||:
Yeast   188 YIIKKDEVVKRYLK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 41/202 (20%)
Pr_beta_C 240..274 CDD:463597
PUP3NP_011020.3 proteasome_beta_type_3 8..201 CDD:239728 41/203 (20%)
Blue background indicates that the domain is not in the aligned region.

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