DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and PRE1

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_010928.1 Gene:PRE1 / 856731 SGDID:S000000814 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:163 Identity:45/163 - (27%)
Similarity:73/163 - (44%) Gaps:13/163 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLTTSAELDLHR 115
            |:||..:|.|||.:....|.|..|...:..|...|..|.....||.|.||........|.:.|:.
Yeast     4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYS 68

  Fly   116 LNTERRVPVVCASMMLRRTLFR-------YQGHIGAALVMGGVD--TTGPQLYCIYPCGSNDKIP 171
            :..:..:.....|..:|:.|.:       ||.::    ::||.|  ...|:||.|...|:..::|
Yeast    69 IREDYELSPQAVSSFVRQELAKSIRSRRPYQVNV----LIGGYDKKKNKPELYQIDYLGTKVELP 129

  Fly   172 YAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVR 204
            |.|.|.......|:|:|.::||:..|:|..|::
Yeast   130 YGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 45/163 (28%)
Pr_beta_C 240..274 CDD:463597
PRE1NP_010928.1 proteasome_beta_type_2 1..194 CDD:239727 45/163 (28%)
Blue background indicates that the domain is not in the aligned region.

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