DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta2R1 and Psmb7

DIOPT Version :10

Sequence 1:NP_572267.1 Gene:Prosbeta2R1 / 31511 FlyBaseID:FBgn0029812 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_445984.1 Gene:Psmb7 / 85492 RGDID:621093 Length:277 Species:Rattus norvegicus


Alignment Length:263 Identity:149/263 - (56%)
Similarity:197/263 - (74%) Gaps:6/263 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GFNFINCRRN----AELLSKGYEPPKAIKTGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKI 82
            ||:|.|||||    |:...||::.|||.||||:|.|::||||::||||||||||.:|:|||||||
  Rat    13 GFSFDNCRRNAVLEADFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKI 77

  Fly    83 HHLQDHIYCCGAGTAADTEMITLTTSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALV 147
            |.:..:||||||||||||:|.|...|:.|:||.|.|.|...||.|:.||::.||||||:||||||
  Rat    78 HFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALV 142

  Fly   148 MGGVDTTGPQLYCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVF 212
            :||||.|||.||.|||.||.||:||..||||:||||:|.|..::||::.|:.|:||.|||:||:|
  Rat   143 LGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIF 207

  Fly   213 NDLGSGSNIDLCVITAKGAVYLRTDTIASEKGERLGKYGIKPNSTMVTS--ISVLSLQVTDERIY 275
            ||||||||||||||:.....:||..::.::||.|.|:|..:..:|.|.:  ::.|.|:|.:|.:.
  Rat   208 NDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKVTPLELEVLEEIVQ 272

  Fly   276 AVD 278
            .:|
  Rat   273 TMD 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta2R1NP_572267.1 proteasome_beta_type_7 49..236 CDD:239732 119/186 (64%)
Pr_beta_C 240..274 CDD:463597 11/35 (31%)
Psmb7NP_445984.1 proteasome_beta_type_7 44..232 CDD:239732 120/187 (64%)
Pr_beta_C 235..271 CDD:463597 11/35 (31%)

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